RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 IKBKEQ14164 716 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 DUOXA2Q1HG44 320 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 CCNJLQ8IV13 435 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 TMC1Q8TDI8 760 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 SOX17Q9H6I2 414 aaPredicted RBP6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 BIN2Q9UBW5 565 aaPredicted RBP6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 DCTN4Q9UJW0 460 aa6.52□□□□□ -1.37
RNU4-55P-201ENST00000410731 ARL4DP49703 201 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 KIAA1211Q6ZU35 1233 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 UBASH3BQ8TF42 649 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 SLC7A3Q8WY07 619 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 TCF12Q99081 682 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 CEP41Q9BYV8 373 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 LIN7BQ9HAP6 207 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 NPHS2Q9NP85 383 aa6.51□□□□□ -1.37
RNU4-55P-201ENST00000410731 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 SOX1O00570 391 aaPredicted RBP6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 DDX3YO15523 660 aaKnown RBP6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 GLB1P16278 677 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 NLRP12P59046 1061 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 PRSS36Q5K4E3 855 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 PRR23CQ6ZRP0 262 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 TMC7Q7Z402 723 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 NIF3L1Q9GZT8 377 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 IVNS1ABPQ9Y6Y0 642 aa6.5□□□□□ -1.37
RNU4-55P-201ENST00000410731 A0A096LPE4 126 aa6.49□□□□□ -1.37
RNU4-55P-201ENST00000410731 A0A1W2PPZ6 126 aa6.49□□□□□ -1.37
RNU4-55P-201ENST00000410731 UVSSAQ2YD98 709 aa6.49□□□□□ -1.37
RNU4-55P-201ENST00000410731 HGSNATQ68CP4 663 aa6.49□□□□□ -1.37
RNU4-55P-201ENST00000410731 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
RNU4-55P-201ENST00000410731 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
RNU4-55P-201ENST00000410731 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 MAPK1P28482 360 aa6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 GRIA4P48058 902 aa6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 PRPF40BQ6NWY9 871 aaKnown RBP6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 UBL7Q96S82 380 aaPredicted RBP6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 RNF208Q9H0X6 261 aa6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 EHD4Q9H223 541 aa6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 CLEC4MQ9H2X3 399 aaPredicted RBP6.48□□□□□ -1.37
RNU4-55P-201ENST00000410731 TREHO43280 583 aa6.47□□□□□ -1.37
RNU4-55P-201ENST00000410731 PCDH1Q08174 1060 aa6.47□□□□□ -1.37
RNU4-55P-201ENST00000410731 SPRED3Q2MJR0 410 aa6.47□□□□□ -1.37
RNU4-55P-201ENST00000410731 ANKRD34AQ69YU3 496 aa6.47□□□□□ -1.37
RNU4-55P-201ENST00000410731 FAM46AQ96IP4 442 aaKnown RBP6.47□□□□□ -1.37
RNU4-55P-201ENST00000410731 RUSC1Q9BVN2 902 aa6.47□□□□□ -1.37
RNU4-55P-201ENST00000410731 ITPKAP23677 461 aa6.46□□□□□ -1.38
RNU4-55P-201ENST00000410731 PTPN12Q05209 780 aaKnown RBP6.46□□□□□ -1.38
RNU4-55P-201ENST00000410731 DSC3Q14574 896 aa6.46□□□□□ -1.38
RNU4-55P-201ENST00000410731 ZMYM1Q5SVZ6 1142 aa6.46□□□□□ -1.38
RNU4-55P-201ENST00000410731 ZNF576Q9H609 170 aa6.46□□□□□ -1.38
RNU4-55P-201ENST00000410731 ABCB6Q9NP58 842 aa6.46□□□□□ -1.38
RNU4-55P-201ENST00000410731 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 MEGF11A6BM72 1044 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 GADD45BO75293 160 aaPredicted RBP6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 ZNF423Q2M1K9 1284 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 ARMC10Q8N2F6 343 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 UTP4Q969X6 686 aaKnown RBP6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 USP26Q9BXU7 913 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 NRSN2Q9GZP1 204 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 TRAK1Q9UPV9 953 aa6.45□□□□□ -1.38
RNU4-55P-201ENST00000410731 DHX15O43143 795 aaKnown RBP6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 B3GALT4O96024 378 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 PREPP48147 710 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 GSTM4Q03013 218 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 GRM2Q14416 872 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 ENOX2Q16206 610 aaKnown RBP6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 FDX2Q6P4F2 183 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 GLIS3Q8NEA6 775 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 MYRFLQ96LU7 910 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 TMPRSS13Q9BYE2 586 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 RAXQ9Y2V3 346 aa6.44□□□□□ -1.38
RNU4-55P-201ENST00000410731 PNMA6FA0A0J9YX94 578 aa6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 SART1O43290 800 aaKnown RBP6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 FSTP19883 344 aa6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 FMR1Q06787 632 aaKnown RBP eCLIP6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 RPS26P11Q5JNZ5 115 aaPredicted RBP6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 SLC51AQ86UW1 340 aa6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 ZSCAN29Q8IWY8 852 aaPredicted RBP6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 SMG8Q8ND04 991 aaKnown RBP6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 EPS8L3Q8TE67 593 aaKnown RBP6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 ASB16Q96NS5 453 aa6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 HIF3AQ9Y2N7 669 aa6.43□□□□□ -1.38
RNU4-55P-201ENST00000410731 TMEM238LA0A1B0GVL6 79 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 GSC2O15499 205 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 TIAF1O95411 115 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 DLGAP3O95886 979 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 PLCB3Q01970 1234 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 NUTM2GQ5VZR2 741 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 Q8N3U1 123 aa6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 DDX54Q8TDD1 881 aaKnown RBP6.42□□□□□ -1.38
RNU4-55P-201ENST00000410731 NLRP2Q9NX02 1062 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms