RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PCDHA7Q9UN72 937 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 WDR19Q8NEZ3 1342 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 YEATS4O95619 227 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLIP4-204ENST00000404424 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 DHX40Q8IX18 779 aaKnown RBP12.53□□□□□ -0.4
CLIP4-204ENST00000404424 PDCL2Q8N4E4 241 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
CLIP4-204ENST00000404424 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.4
CLIP4-204ENST00000404424 TPD52L1Q16890 204 aaPredicted RBP12.52□□□□□ -0.4
CLIP4-204ENST00000404424 CHST3Q7LGC8 479 aa12.52□□□□□ -0.4
CLIP4-204ENST00000404424 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.4
CLIP4-204ENST00000404424 APPBP2Q92624 585 aa12.52□□□□□ -0.4
CLIP4-204ENST00000404424 C8orf76Q96K31 380 aa12.52□□□□□ -0.4
CLIP4-204ENST00000404424 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.4
CLIP4-204ENST00000404424 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.4
CLIP4-204ENST00000404424 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
CLIP4-204ENST00000404424 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.41
CLIP4-204ENST00000404424 NCOA7Q8NI08 942 aa12.52□□□□□ -0.41
CLIP4-204ENST00000404424 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
CLIP4-204ENST00000404424 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
CLIP4-204ENST00000404424 WDR17Q8IZU2 1322 aa12.52□□□□□ -0.41
CLIP4-204ENST00000404424 FGAP02671 866 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 WASHC4Q2M389 1173 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
CLIP4-204ENST00000404424 FBXO18Q8NFZ0 1043 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 BPIFA3Q9BQP9 254 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 KCND1Q9NSA2 647 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 PRC1O43663 620 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 GSDMDP57764 484 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 STK38Q15208 465 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
CLIP4-204ENST00000404424 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
CLIP4-204ENST00000404424 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 FOXP2O15409 715 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
CLIP4-204ENST00000404424 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
CLIP4-204ENST00000404424 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
CLIP4-204ENST00000404424 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 CPLX1O14810 134 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 SPTLC2O15270 562 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
CLIP4-204ENST00000404424 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 ARID3AQ99856 593 aa12.5□□□□□ -0.41
CLIP4-204ENST00000404424 ORC3Q9UBD5 711 aaPredicted RBP12.5□□□□□ -0.41
CLIP4-204ENST00000404424 ZNF213O14771 459 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 CSF1RP07333 972 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 SKILP12757 684 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 NWD2Q9ULI1 1742 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 ADORA1P30542 326 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 NDUFA8P51970 172 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 IFIT5Q13325 482 aaKnown RBP12.49□□□□□ -0.41
CLIP4-204ENST00000404424 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLIP4-204ENST00000404424 OSBPL5Q9H0X9 879 aaPredicted RBP12.49□□□□□ -0.41
CLIP4-204ENST00000404424 CLIC4Q9Y696 253 aa12.49□□□□□ -0.41
CLIP4-204ENST00000404424 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 ZAP70P43403 619 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 HAND2P61296 217 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 TPM4P67936 248 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 NCBP1Q09161 790 aaKnown RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 ZBTB38Q8NAP3 1195 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 FEZ1Q99689 392 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 GPAA1O43292 621 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 POLR3DP05423 398 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 IL2RBP14784 551 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 ANTXR2P58335 489 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 CCZ1BP86790 482 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 CCZ1P86791 482 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 TRDNQ13061 729 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 PTPN14Q15678 1187 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 NYAP1Q6ZVC0 841 aa12.48□□□□□ -0.41
CLIP4-204ENST00000404424 ZNF512BQ96KM6 892 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-204ENST00000404424 CMA1P23946 247 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 KIF23Q02241 960 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms