RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 PHTF2Q8N3S3 785 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 KCNH5Q8NCM2 988 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 TMC1Q8TDI8 760 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 IER2Q9BTL4 223 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 WNK3Q9BYP7 1800 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 AATKQ6ZMQ8 1374 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 ZBTB7BO15156 539 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 GIGYF1O75420 1035 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 DNAJB2P25686 324 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 GCGRP47871 477 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 SEC13P55735 322 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 PLCB3Q01970 1234 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 EHHADHQ08426 723 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 EML3Q32P44 896 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 MAP9Q49MG5 647 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 KRBA2Q6ZNG9 492 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 CNPY4Q8N129 248 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 SIX5Q8N196 739 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 PNISRQ8TF01 805 aaKnown RBP6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 PRDM11Q9NQV5 511 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 CEP126Q9P2H0 1117 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 THSD7AQ9UPZ6 1657 aa6.86□□□□□ -1.31
HMGB3P7-201ENST00000400214 RGS12O14924 1447 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 FAM208AQ9UK61 1670 aaKnown RBP6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 CCDC189A1A4V9 331 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 SFI1A8K8P3 1242 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 C3orf80F5H4A9 247 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 ATP1A2P50993 1020 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 USP48Q86UV5 1035 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 ARHGEF25Q86VW2 580 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 CKAP2LQ8IYA6 745 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 C8orf48Q96LL4 319 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 PURBQ96QR8 312 aaKnown RBP6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 MTA3Q9BTC8 594 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 TMEM134Q9H6X4 195 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 GEMIN8Q9NWZ8 242 aaKnown RBP6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 BTG4Q9NY30 223 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 TCEAL9Q9UHQ7 104 aa6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 THRAP3Q9Y2W1 955 aaKnown RBP6.85□□□□□ -1.31
HMGB3P7-201ENST00000400214 PARP4Q9UKK3 1724 aaKnown RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 SPATA31A5Q5VU36 1347 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 SPATA31A7Q8IWB4 1347 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 TRIM6-TRIM34B2RNG4 842 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 NDUFB5O43674 189 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 KIF4AO95239 1232 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 FKBP5Q13451 457 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 UBE4AQ14139 1066 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 NAA30Q147X3 362 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 NME9Q86XW9 330 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 SYMPKQ92797 1274 aaKnown RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 FRMD6Q96NE9 622 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 CARD14Q9BXL6 1004 aa6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 TYW1Q9NV66 732 aaKnown RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 BSDC1Q9NW68 430 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 COL5A2P05997 1499 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P7-201ENST00000400214 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 FYB1O15117 783 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 NPR3P17342 541 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 CHRNA2Q15822 529 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 FERMT3Q86UX7 667 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 TSR2Q969E8 191 aaKnown RBP6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 MKL1Q969V6 931 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 COMMD10Q9Y6G5 202 aa6.83□□□□□ -1.32
HMGB3P7-201ENST00000400214 RGPD2P0DJD1 1756 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 SPATA31A1Q5TZJ5 1347 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 FAM13AO94988 1023 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 IGHA2P01877 340 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 CTSHP09668 335 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 MPSTP25325 297 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 GYS2P54840 703 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 FAM43BQ6ZT52 329 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 TPCN2Q8NHX9 752 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 GAS2L2Q8NHY3 880 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 IL17RAQ96F46 866 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 SRPK1Q96SB4 655 aaKnown RBP6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 KANSL2Q9H9L4 492 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 NOD1Q9Y239 953 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 SBF2Q86WG5 1849 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 CRB1P82279 1406 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 NSD3Q9BZ95 1437 aa6.82□□□□□ -1.32
HMGB3P7-201ENST00000400214 KIF7Q2M1P5 1343 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 GPR182O15218 404 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 VIL1P09327 827 aaKnown RBP6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 GJA8P48165 433 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms