RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CCDC129Q6ZRS4 1044 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 MAATS1Q7Z4T9 603 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 GUCA1BQ9UMX6 200 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 CHMP4BP1P59074 171 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 PTH1RQ03431 593 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 TPCN1Q9ULQ1 816 aa12.6□□□□□ -0.39
HPS4-202ENST00000398145 WDHD1O75717 1129 aaPredicted RBP12.59□□□□□ -0.39
HPS4-202ENST00000398145 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
HPS4-202ENST00000398145 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
HPS4-202ENST00000398145 NLRP12P59046 1061 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 ETF1P62495 437 aaKnown RBP12.59□□□□□ -0.39
HPS4-202ENST00000398145 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 PSMA7O14818 248 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
HPS4-202ENST00000398145 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
HPS4-202ENST00000398145 TACC1O75410 805 aa12.58□□□□□ -0.39
HPS4-202ENST00000398145 IDEP14735 1019 aa12.58□□□□□ -0.39
HPS4-202ENST00000398145 TUBB2AQ13885 445 aa12.58□□□□□ -0.39
HPS4-202ENST00000398145 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.39
HPS4-202ENST00000398145 TUBB2BQ9BVA1 445 aa12.58□□□□□ -0.39
HPS4-202ENST00000398145 MRVI1Q9Y6F6 885 aa12.58□□□□□ -0.39
HPS4-202ENST00000398145 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
HPS4-202ENST00000398145 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
HPS4-202ENST00000398145 CCDC113Q9H0I3 377 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
HPS4-202ENST00000398145 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 ATP10AO60312 1499 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 GPTP24298 496 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 KIF5BP33176 963 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 MAP2K1Q02750 393 aaPredicted RBP12.58□□□□□ -0.4
HPS4-202ENST00000398145 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 NRBP1Q9UHY1 535 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 PLA2R1Q13018 1463 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 SEPT7Q16181 437 aaKnown RBP12.58□□□□□ -0.4
HPS4-202ENST00000398145 OTUD7BQ6GQQ9 843 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 IGSF22Q8N9C0 903 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
HPS4-202ENST00000398145 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 TNNI3KQ59H18 835 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 DRC1Q96MC2 740 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 DBNDD2Q9BQY9 259 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 LUC7L2Q9Y383 392 aaKnown RBP12.57□□□□□ -0.4
HPS4-202ENST00000398145 FPGT-TNNI3KV9GXZ4 949 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 ASXL2Q76L83 1435 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 OAS2P29728 719 aaKnown RBP12.57□□□□□ -0.4
HPS4-202ENST00000398145 USP5P45974 858 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 ADALQ6DHV7 355 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 KLHDC4Q8TBB5 520 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 PPP1R12BO60237 982 aaPredicted RBP12.57□□□□□ -0.4
HPS4-202ENST00000398145 STAT6P42226 847 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 KBTBD3Q8NAB2 608 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 CACTINQ8WUQ7 758 aaKnown RBP12.57□□□□□ -0.4
HPS4-202ENST00000398145 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 ESR2Q92731 530 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
HPS4-202ENST00000398145 LSG1Q9H089 658 aaKnown RBP12.57□□□□□ -0.4
HPS4-202ENST00000398145 TMCO5BA8MYB1 307 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 HOXC9P31274 260 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 SMC1AQ14683 1233 aaKnown RBP12.56□□□□□ -0.4
HPS4-202ENST00000398145 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 USP28Q96RU2 1077 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 NFE2L3Q9Y4A8 694 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 MYO1BO43795 1136 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 RXRAP19793 462 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 GPR161Q8N6U8 529 aaKnown RBP12.56□□□□□ -0.4
HPS4-202ENST00000398145 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 NOP2P46087 812 aaKnown RBP12.56□□□□□ -0.4
HPS4-202ENST00000398145 TIMM10P62072 90 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 CCDC40Q4G0X9 1142 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 OTUD6BQ8N6M0 293 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 UBXN1Q04323 297 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 FAM76AQ8TAV0 307 aa12.56□□□□□ -0.4
HPS4-202ENST00000398145 NAPGQ99747 312 aaPredicted RBP12.56□□□□□ -0.4
HPS4-202ENST00000398145 TTF2Q9UNY4 1162 aaKnown RBP12.56□□□□□ -0.4
HPS4-202ENST00000398145 ZSCAN26Q16670 478 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
HPS4-202ENST00000398145 ZRSR2Q15696 482 aaKnown RBP12.55□□□□□ -0.4
HPS4-202ENST00000398145 ADCK5Q3MIX3 580 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 IQUBQ8NA54 791 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 EXOC1Q9NV70 894 aa12.55□□□□□ -0.4
HPS4-202ENST00000398145 ATP7AQ04656 1500 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms