RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 TRMT1Q9NXH9 659 aaKnown RBP21.46■■□□□ 1.03
IFFO1-204ENST00000396840 CTAGE5O15320 804 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 STK38Q15208 465 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 C8orf76Q96K31 380 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 KIF1AQ12756 1690 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 MST1RQ04912 1400 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 RXRAP19793 462 aa21.45■■□□□ 1.02
IFFO1-204ENST00000396840 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
IFFO1-204ENST00000396840 ISM2Q6H9L7 571 aa21.45■■□□□ 1.02
IFFO1-204ENST00000396840 PRDM11Q9NQV5 511 aa21.45■■□□□ 1.02
IFFO1-204ENST00000396840 COL18A1P39060 1754 aa21.45■■□□□ 1.02
IFFO1-204ENST00000396840 MRPS27Q92552 414 aaKnown RBP21.45■■□□□ 1.02
IFFO1-204ENST00000396840 U2AF2P26368 475 aaKnown RBP eCLIP21.44■■□□□ 1.021e-9■■■■□ 21.9
IFFO1-204ENST00000396840 ANO10Q9NW15 660 aa21.44■■□□□ 1.02
IFFO1-204ENST00000396840 ORC3Q9UBD5 711 aaPredicted RBP21.44■■□□□ 1.02
IFFO1-204ENST00000396840 CPLX1O14810 134 aa21.44■■□□□ 1.02
IFFO1-204ENST00000396840 SKILP12757 684 aa21.44■■□□□ 1.02
IFFO1-204ENST00000396840 STRN4Q9NRL3 753 aa21.44■■□□□ 1.02
IFFO1-204ENST00000396840 MYH15Q9Y2K3 1946 aa21.44■■□□□ 1.02
IFFO1-204ENST00000396840 CAVIN2O95810 425 aa21.43■■□□□ 1.02
IFFO1-204ENST00000396840 CEP57L1Q8IYX8 460 aa21.43■■□□□ 1.02
IFFO1-204ENST00000396840 GLI3P10071 1580 aa21.43■■□□□ 1.02
IFFO1-204ENST00000396840 DPCR1Q3MIW9 517 aa21.43■■□□□ 1.02
IFFO1-204ENST00000396840 FMR1NBQ8N0W7 255 aaPredicted RBP21.43■■□□□ 1.02
IFFO1-204ENST00000396840 AIFM3Q96NN9 605 aa21.43■■□□□ 1.02
IFFO1-204ENST00000396840 CCDC69A6NI79 296 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 RALYLQ86SE5 291 aaKnown RBP21.42■■□□□ 1.02
IFFO1-204ENST00000396840 PCDH11XQ9BZA7 1347 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 PCDH11YQ9BZA8 1340 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 GPTP24298 496 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 ZRSR1Q15695 479 aaKnown RBP21.42■■□□□ 1.02
IFFO1-204ENST00000396840 LINC00301Q8NCQ3 95 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 NKX2-3Q8TAU0 364 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 KIF28PB7ZC32 967 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 CIAO1O76071 339 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 ANTXR2P58335 489 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 SARM1Q6SZW1 724 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 MRFAP1L1Q96HT8 127 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 HPS5Q9UPZ3 1129 aa21.42■■□□□ 1.02
IFFO1-204ENST00000396840 CTIFO43310 598 aaKnown RBP21.41■■□□□ 1.02
IFFO1-204ENST00000396840 MARCKSP29966 332 aaPredicted RBP21.41■■□□□ 1.02
IFFO1-204ENST00000396840 NCBP1Q09161 790 aaKnown RBP21.41■■□□□ 1.02
IFFO1-204ENST00000396840 CTNNA3Q9UI47 895 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 ZNF213O14771 459 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 GPAA1O43292 621 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 CDC25BP30305 580 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 CEP135Q66GS9 1140 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 ADALQ6DHV7 355 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 CCDC112Q8NEF3 446 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 RTEL1Q9NZ71 1219 aa21.41■■□□□ 1.02
IFFO1-204ENST00000396840 TNS3Q68CZ2 1445 aa21.4■■□□□ 1.02
IFFO1-204ENST00000396840 TJP1Q07157 1748 aa21.4■■□□□ 1.02
IFFO1-204ENST00000396840 APPP05067 770 aa21.4■■□□□ 1.02
IFFO1-204ENST00000396840 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.4■■□□□ 1.02
IFFO1-204ENST00000396840 V9GYY5 206 aaPredicted RBP21.4■■□□□ 1.02
IFFO1-204ENST00000396840 SMTNL1A8MU46 457 aa21.4■■□□□ 1.02
IFFO1-204ENST00000396840 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
IFFO1-204ENST00000396840 SPATA31A3Q5VYP0 1347 aa21.4■■□□□ 1.02
IFFO1-204ENST00000396840 LAMB4A4D0S4 1761 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 SPTLC2O15270 562 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 SMC2O95347 1197 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 IFIT5Q13325 482 aaKnown RBP21.39■■□□□ 1.01
IFFO1-204ENST00000396840 MB21D2Q8IYB1 491 aaPredicted RBP21.39■■□□□ 1.01
IFFO1-204ENST00000396840 FBXO18Q8NFZ0 1043 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 NCOA7Q8NI08 942 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 ANKRD7Q92527 254 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 TCIRG1Q13488 830 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 MYSM1Q5VVJ2 828 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 SYNE3Q6ZMZ3 975 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.01
IFFO1-204ENST00000396840 METTL24Q5JXM2 366 aa21.38■■□□□ 1.01
IFFO1-204ENST00000396840 ATL3Q6DD88 541 aa21.38■■□□□ 1.01
IFFO1-204ENST00000396840 APPBP2Q92624 585 aa21.38■■□□□ 1.01
IFFO1-204ENST00000396840 NAT10Q9H0A0 1025 aaKnown RBP21.38■■□□□ 1.01
IFFO1-204ENST00000396840 PKD1L3Q7Z443 1732 aa21.38■■□□□ 1.01
IFFO1-204ENST00000396840 ADAMTSL3P82987 1691 aa21.38■■□□□ 1.01
IFFO1-204ENST00000396840 KIAA1468Q9P260 1216 aa21.38■■□□□ 1.01
IFFO1-204ENST00000396840 NWD2Q9ULI1 1742 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 ERVV-2B6SEH9 535 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 IDH1O75874 414 aaKnown RBP21.37■■□□□ 1.01
IFFO1-204ENST00000396840 MCAMP43121 646 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 INCENPQ9NQS7 918 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 CCZ1BP86790 482 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 CCZ1P86791 482 aaPredicted RBP21.37■■□□□ 1.01
IFFO1-204ENST00000396840 PTPN14Q15678 1187 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 LDHAL6AQ6ZMR3 332 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 PHKBQ93100 1093 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 ISCA1Q9BUE6 129 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 SENP2Q9HC62 589 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 ATG3Q9NT62 314 aa21.37■■□□□ 1.01
IFFO1-204ENST00000396840 WDR17Q8IZU2 1322 aa21.36■■□□□ 1.01
IFFO1-204ENST00000396840 NUP188Q5SRE5 1749 aa21.36■■□□□ 1.01
IFFO1-204ENST00000396840 DHX16O60231 1041 aaKnown RBP21.36■■□□□ 1.01
IFFO1-204ENST00000396840 LRRFIP1Q32MZ4 808 aaKnown RBP21.36■■□□□ 1.01
IFFO1-204ENST00000396840 DNAJC10Q8IXB1 793 aa21.36■■□□□ 1.01
IFFO1-204ENST00000396840 SMAP1Q8IYB5 467 aaPredicted RBP21.36■■□□□ 1.01
IFFO1-204ENST00000396840 ZNF202O95125 648 aa21.36■■□□□ 1.01
IFFO1-204ENST00000396840 NBPF11Q86T75 865 aa21.36■■□□□ 1.01
IFFO1-204ENST00000396840 XPO4Q9C0E2 1151 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms