RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 FRAT2O75474 233 aaPredicted RBP21.78■■□□□ 1.08
UPK3A-202ENST00000396082 SASH1O94885 1247 aa21.78■■□□□ 1.08
UPK3A-202ENST00000396082 SLC5A1P13866 664 aa21.78■■□□□ 1.08
UPK3A-202ENST00000396082 TDRD7Q8NHU6 1098 aaKnown RBP21.78■■□□□ 1.08
UPK3A-202ENST00000396082 CIAO1O76071 339 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 NBPF9Q3BBW0 867 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 DLK2Q6UY11 383 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 ATG9AQ7Z3C6 839 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 CERS5Q8N5B7 392 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 CEP126Q9P2H0 1117 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 IQSEC3Q9UPP2 1182 aaPredicted RBP21.77■■□□□ 1.08
UPK3A-202ENST00000396082 PA2G4Q9UQ80 394 aaKnown RBP21.77■■□□□ 1.08
UPK3A-202ENST00000396082 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
UPK3A-202ENST00000396082 IL15P40933 162 aaPredicted RBP21.76■■□□□ 1.07
UPK3A-202ENST00000396082 VEGFBP49765 207 aa21.76■■□□□ 1.07
UPK3A-202ENST00000396082 FKBP1AP62942 108 aaKnown RBP21.76■■□□□ 1.07
UPK3A-202ENST00000396082 GRM1Q13255 1194 aa21.76■■□□□ 1.07
UPK3A-202ENST00000396082 MFSD14BQ5SR56 506 aa21.76■■□□□ 1.07
UPK3A-202ENST00000396082 COPRSQ9NQ92 184 aa21.76■■□□□ 1.07
UPK3A-202ENST00000396082 FAM205AQ6ZU69 1335 aa21.76■■□□□ 1.07
UPK3A-202ENST00000396082 PITPNM2Q9BZ72 1349 aa21.76■■□□□ 1.07
UPK3A-202ENST00000396082 WNT10BO00744 389 aa21.75■■□□□ 1.07
UPK3A-202ENST00000396082 CHAF1AQ13111 956 aaPredicted RBP21.75■■□□□ 1.07
UPK3A-202ENST00000396082 FBXO33Q7Z6M2 555 aa21.75■■□□□ 1.07
UPK3A-202ENST00000396082 LPIN2Q92539 896 aa21.75■■□□□ 1.07
UPK3A-202ENST00000396082 FGFR2P21802 821 aa21.74■■□□□ 1.07
UPK3A-202ENST00000396082 ECE1P42892 770 aa21.74■■□□□ 1.07
UPK3A-202ENST00000396082 MTX1Q13505 466 aa21.74■■□□□ 1.07
UPK3A-202ENST00000396082 DLGAP5Q15398 846 aa21.74■■□□□ 1.07
UPK3A-202ENST00000396082 ATP2B3Q16720 1220 aa21.74■■□□□ 1.07
UPK3A-202ENST00000396082 ARAP2Q8WZ64 1704 aa21.74■■□□□ 1.07
UPK3A-202ENST00000396082 MYH13Q9UKX3 1938 aa21.73■■□□□ 1.07
UPK3A-202ENST00000396082 BCAMP50895 628 aa21.73■■□□□ 1.07
UPK3A-202ENST00000396082 RBM5P52756 815 aaKnown RBP eCLIP21.73■■□□□ 1.07
UPK3A-202ENST00000396082 SAPCD2Q86UD0 394 aa21.73■■□□□ 1.07
UPK3A-202ENST00000396082 CDCA5Q96FF9 252 aa21.73■■□□□ 1.07
UPK3A-202ENST00000396082 WDR33Q9C0J8 1336 aaKnown RBP21.73■■□□□ 1.07
UPK3A-202ENST00000396082 HSPA1AP0DMV8 641 aaKnown RBP21.72■■□□□ 1.07
UPK3A-202ENST00000396082 HSPA1BP0DMV9 641 aaKnown RBP21.72■■□□□ 1.07
UPK3A-202ENST00000396082 RLBP1P12271 317 aa21.72■■□□□ 1.07
UPK3A-202ENST00000396082 C2orf69Q8N8R5 385 aa21.72■■□□□ 1.07
UPK3A-202ENST00000396082 CAPNS2Q96L46 248 aa21.72■■□□□ 1.07
UPK3A-202ENST00000396082 GBA2Q9HCG7 927 aaPredicted RBP21.72■■□□□ 1.07
UPK3A-202ENST00000396082 SCAF8Q9UPN6 1271 aaKnown RBP21.72■■□□□ 1.07
UPK3A-202ENST00000396082 MYO1BO43795 1136 aa21.71■■□□□ 1.07
UPK3A-202ENST00000396082 MS4A1P11836 297 aa21.71■■□□□ 1.07
UPK3A-202ENST00000396082 CFAP100Q494V2 611 aa21.71■■□□□ 1.07
UPK3A-202ENST00000396082 CYP4F22Q6NT55 531 aa21.71■■□□□ 1.07
UPK3A-202ENST00000396082 APOBEC3FQ8IUX4 373 aaKnown RBP21.71■■□□□ 1.07
UPK3A-202ENST00000396082 TBC1D22AQ8WUA7 517 aa21.71■■□□□ 1.07
UPK3A-202ENST00000396082 TTF2Q9UNY4 1162 aaKnown RBP21.71■■□□□ 1.07
UPK3A-202ENST00000396082 HUNKP57058 714 aa21.7■■□□□ 1.06
UPK3A-202ENST00000396082 ECM29Q5VYK3 1845 aa21.7■■□□□ 1.06
UPK3A-202ENST00000396082 MTMR14Q8NCE2 650 aa21.69■■□□□ 1.06
UPK3A-202ENST00000396082 PANK1Q8TE04 598 aa21.69■■□□□ 1.06
UPK3A-202ENST00000396082 ZBED3Q96IU2 234 aaPredicted RBP21.69■■□□□ 1.06
UPK3A-202ENST00000396082 C1orf115Q9H7X2 142 aa21.69■■□□□ 1.06
UPK3A-202ENST00000396082 GNL3LQ9NVN8 582 aaKnown RBP21.69■■□□□ 1.06
UPK3A-202ENST00000396082 RCAN3Q9UKA8 241 aa21.69■■□□□ 1.06
UPK3A-202ENST00000396082 PNMA6EA0A0J9YXQ4 647 aa21.68■■□□□ 1.06
UPK3A-202ENST00000396082 G3BP1Q13283 466 aaKnown RBP eCLIP21.68■■□□□ 1.06
UPK3A-202ENST00000396082 HHIPL1Q96JK4 782 aa21.68■■□□□ 1.06
UPK3A-202ENST00000396082 PCDHAC2Q9Y5I4 1007 aa21.68■■□□□ 1.06
UPK3A-202ENST00000396082 SPDYE2BA6NHP3 402 aa21.67■■□□□ 1.06
UPK3A-202ENST00000396082 SPDYE6P0CI01 402 aa21.67■■□□□ 1.06
UPK3A-202ENST00000396082 NF2P35240 595 aa21.67■■□□□ 1.06
UPK3A-202ENST00000396082 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
UPK3A-202ENST00000396082 AKAP2Q9Y2D5 859 aa21.67■■□□□ 1.06
UPK3A-202ENST00000396082 CLRN2A0PK11 232 aa21.66■■□□□ 1.06
UPK3A-202ENST00000396082 ZBTB7BO15156 539 aaPredicted RBP21.66■■□□□ 1.06
UPK3A-202ENST00000396082 TFCP2Q12800 502 aa21.66■■□□□ 1.06
UPK3A-202ENST00000396082 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
UPK3A-202ENST00000396082 VEZTQ9HBM0 779 aa21.66■■□□□ 1.06
UPK3A-202ENST00000396082 SERPINA10Q9UK55 444 aa21.66■■□□□ 1.06
UPK3A-202ENST00000396082 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
UPK3A-202ENST00000396082 TTLL12Q14166 644 aaPredicted RBP21.65■■□□□ 1.06
UPK3A-202ENST00000396082 WDR66Q8TBY9 1149 aa21.65■■□□□ 1.06
UPK3A-202ENST00000396082 PRMT6Q96LA8 375 aaPredicted RBP21.65■■□□□ 1.06
UPK3A-202ENST00000396082 PAPPA2Q9BXP8 1791 aa21.65■■□□□ 1.06
UPK3A-202ENST00000396082 THSD7BQ9C0I4 1608 aa21.65■■□□□ 1.06
UPK3A-202ENST00000396082 MAST3O60307 1309 aa21.64■■□□□ 1.05
UPK3A-202ENST00000396082 A0A1B0GUL7 405 aa21.64■■□□□ 1.05
UPK3A-202ENST00000396082 ADORA1P30542 326 aa21.64■■□□□ 1.05
UPK3A-202ENST00000396082 CRKP46108 304 aa21.64■■□□□ 1.05
UPK3A-202ENST00000396082 ATP8B2P98198 1209 aa21.64■■□□□ 1.05
UPK3A-202ENST00000396082 MAP2K1Q02750 393 aaPredicted RBP21.64■■□□□ 1.05
UPK3A-202ENST00000396082 COL1A1P02452 1464 aaPredicted RBP21.64■■□□□ 1.05
UPK3A-202ENST00000396082 AOC2O75106 756 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 PHKA1P46020 1223 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 TIMM10P62072 90 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 FKBP1BP68106 108 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 GRIK5Q16478 980 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 RGMBQ6NW40 437 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 TEKT1Q969V4 418 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 NEUROD6Q96NK8 337 aa21.63■■□□□ 1.05
UPK3A-202ENST00000396082 ZNF157P51786 506 aaPredicted RBP21.62■■□□□ 1.05
UPK3A-202ENST00000396082 POLA2Q14181 598 aa21.62■■□□□ 1.05
UPK3A-202ENST00000396082 CCDC102BQ68D86 513 aa21.62■■□□□ 1.05
UPK3A-202ENST00000396082 BEGAINQ9BUH8 593 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms