RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 NRBF2Q96F24 287 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 SPINK5Q9NQ38 1064 aaPredicted RBP8.97□□□□□ -0.97
TRPS1-203ENST00000395715 ZKSCAN5Q9Y2L8 839 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 SLC12A7Q9Y666 1083 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 DUSP27Q5VZP5 1158 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 BAG5Q9UL15 447 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 SAMM50Q9Y512 469 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 POLE2P56282 527 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 EVCP57679 992 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC42Q96M95 316 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
TRPS1-203ENST00000395715 U2AF2P26368 475 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRPS1-203ENST00000395715 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 RPS6KA2Q15349 733 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 SLC4A1P02730 911 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 MCM7P33993 719 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 NLRP6P59044 892 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 ZSCAN26Q16670 478 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 SYT10Q6XYQ8 523 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 MKNK2Q9HBH9 465 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 GOLGA6BA6NDN3 693 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC186Q7Z3E2 898 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 ORC6Q9Y5N6 252 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 COPG1Q9Y678 874 aaKnown RBP8.96□□□□□ -0.97
TRPS1-203ENST00000395715 TDRD9Q8NDG6 1382 aaKnown RBP8.96□□□□□ -0.97
TRPS1-203ENST00000395715 UBA7P41226 1012 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 NEK2P51955 445 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 PMS1P54277 932 aaKnown RBP8.96□□□□□ -0.97
TRPS1-203ENST00000395715 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.96□□□□□ -0.97
TRPS1-203ENST00000395715 CROCCP2Q86T23 111 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 PROSER2Q86WR7 435 aaPredicted RBP8.96□□□□□ -0.97
TRPS1-203ENST00000395715 SIRT1Q96EB6 747 aa8.96□□□□□ -0.97
TRPS1-203ENST00000395715 SSFA2P28290 1259 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 IFT20Q8IY31 132 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 FLCNQ8NFG4 579 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 CCDC124Q96CT7 223 aaKnown RBP8.96□□□□□ -0.98
TRPS1-203ENST00000395715 PPP2R5CQ13362 524 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 TTC19Q6DKK2 380 aaPredicted RBP8.96□□□□□ -0.98
TRPS1-203ENST00000395715 C16orf87Q6PH81 154 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 HDAC9Q9UKV0 1011 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 USP47Q96K76 1375 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 MYL6BP14649 208 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 KARSQ15046 597 aaKnown RBP8.96□□□□□ -0.98
TRPS1-203ENST00000395715 HSP90AA4PQ58FG1 418 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 GIMAP6Q6P9H5 292 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 IMPG2Q9BZV3 1241 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 SCOCQ9UIL1 159 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 TBCAO75347 108 aaKnown RBP8.96□□□□□ -0.98
TRPS1-203ENST00000395715 KCNA4P22459 653 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 GRM1Q13255 1194 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 MSANTD4Q8NCY6 345 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 GDPD2Q9HCC8 539 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRPS1-203ENST00000395715 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 CLTAP09496 248 aa8.96□□□□□ -0.98
TRPS1-203ENST00000395715 TRMT1LQ7Z2T5 733 aaKnown RBP8.96□□□□□ -0.98
TRPS1-203ENST00000395715 PPP4R1Q8TF05 950 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 ZKSCAN8Q15776 578 aaPredicted RBP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 ANKRD20A4Q4UJ75 823 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 ANKRD20A8PQ5CZ79 823 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 ANKRD20A2Q5SQ80 823 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 ANKRD20A1Q5TYW2 823 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 C8orf74Q6P047 294 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 CCDC82Q8N4S0 544 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 PAIP2BQ9ULR5 123 aaKnown RBP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 CNGA4Q8IV77 575 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 CENPKQ9BS16 269 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 TMOD2Q9NZR1 351 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 CECR2Q9BXF3 1484 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 ATP6V0A1Q93050 837 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 CCDC138Q96M89 665 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 TROVE2P10155 538 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 IL1RL1Q01638 556 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 IQCA1Q86XH1 822 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 DIABLOQ9NR28 239 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 MINDY4BA8MYZ0 360 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 IDH1O75874 414 aaKnown RBP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 SYKP43405 635 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 SF3A3Q12874 501 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 NBPF6Q5VWK0 638 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 NBPF4Q96M43 638 aa8.95□□□□□ -0.98
TRPS1-203ENST00000395715 POLR3CQ9BUI4 534 aaPredicted RBP8.95□□□□□ -0.98
TRPS1-203ENST00000395715 RNF40O75150 1001 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 ENAHQ8N8S7 591 aaPredicted RBP8.94□□□□□ -0.98
TRPS1-203ENST00000395715 TRIM8Q9BZR9 551 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 FAM204AQ9H8W3 233 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 SUFUQ9UMX1 484 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
TRPS1-203ENST00000395715 STAT6P42226 847 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 RRAGBQ5VZM2 374 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 KIAA2013Q8IYS2 634 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 EPS15L1Q9UBC2 864 aa8.94□□□□□ -0.98
TRPS1-203ENST00000395715 MIA2Q96PC5 1412 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms