RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 ADAMTS8Q9UP79 889 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 ATICP31939 592 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 ATP6V0A1Q93050 837 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 FERMT2Q96AC1 680 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 CFAP36Q96G28 342 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 UBAP1Q9NZ09 502 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 MSH5O43196 834 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 ATL3Q6DD88 541 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 SNX21Q969T3 373 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 MRPL46Q9H2W6 279 aaKnown RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 TRIM17Q9Y577 477 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 GOLGA6CA6NDK9 693 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 AKR1B10O60218 316 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 GOLGA6DP0CG33 693 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 GOLGA6AQ9NYA3 693 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 HMGB2P26583 209 aaKnown RBP10.15□□□□□ -0.78
CHD2-201ENST00000394196 ATP6V1E1P36543 226 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 RPGRQ92834 1020 aaKnown RBP10.15□□□□□ -0.78
CHD2-201ENST00000394196 ZNF653Q96CK0 615 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.783e-8■■□□□ 14.2
CHD2-201ENST00000394196 TMED10P49755 219 aaKnown RBP10.15□□□□□ -0.78
CHD2-201ENST00000394196 RIPOR2Q9Y4F9 1068 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 FBXO41Q8TF61 875 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 CSRNP2Q9H175 543 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 EMC3Q9P0I2 261 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 MYOM3Q5VTT5 1437 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 TBC1D32Q96NH3 1257 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 COMMD10Q9Y6G5 202 aa10.15□□□□□ -0.78
CHD2-201ENST00000394196 LMNB1P20700 586 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 KRR1Q13601 381 aaKnown RBP10.15□□□□□ -0.79
CHD2-201ENST00000394196 TUBA3CQ13748 450 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 AFAP1L2Q8N4X5 818 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 RAPGEF2Q9Y4G8 1499 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 PPP1R2P41236 205 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 EVA1CP58658 441 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 ZNF449Q6P9G9 518 aa10.15□□□□□ -0.79
CHD2-201ENST00000394196 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 RHOBTB1O94844 696 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 YY1P25490 414 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 ALDH1L2Q3SY69 923 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 DUSP27Q5VZP5 1158 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 IQCDQ96DY2 449 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 IMPACTQ9P2X3 320 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 DKK3Q9UBP4 350 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 N4BP3O15049 544 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.793e-8■■□□□ 11.7
CHD2-201ENST00000394196 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 CFAP157Q5JU67 520 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 ATG3Q9NT62 314 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 STX3Q13277 289 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 TCP11Q8WWU5 503 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 ATP8B1O43520 1251 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 TRIM14Q14142 442 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 ST13P4Q8IZP2 240 aaPredicted RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 NRDE2Q9H7Z3 1164 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 EHMT1Q9H9B1 1298 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 ZNF76P36508 570 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 CNGA4Q8IV77 575 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 WDR75Q8IWA0 830 aaKnown RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 VPS52Q8N1B4 723 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 ZC3H15Q8WU90 426 aaKnown RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 PPM1FP49593 454 aaPredicted RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 CCDC186Q7Z3E2 898 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 MAML3Q96JK9 1138 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 TXNDC16Q9P2K2 825 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 HARSP12081 509 aaKnown RBP10.14□□□□□ -0.79
CHD2-201ENST00000394196 SYT1P21579 422 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 IFT20Q8IY31 132 aa10.14□□□□□ -0.79
CHD2-201ENST00000394196 RMI1Q9H9A7 625 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
CHD2-201ENST00000394196 CCDC25Q86WR0 208 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 RNF41Q9H4P4 317 aaPredicted RBP10.13□□□□□ -0.79
CHD2-201ENST00000394196 MBD2Q9UBB5 411 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 GABPB2Q8TAK5 448 aaPredicted RBP10.13□□□□□ -0.79
CHD2-201ENST00000394196 SUFUQ9UMX1 484 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 CAPN7Q9Y6W3 813 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 ESRRBO95718 433 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 CKAP2LQ8IYA6 745 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 TMX1Q9H3N1 280 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 ABCC11Q96J66 1382 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 ECE1P42892 770 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 SFSWAPQ12872 951 aaKnown RBP10.13□□□□□ -0.79
CHD2-201ENST00000394196 ARHGAP10A1A4S6 786 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 KDM4AO75164 1064 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
CHD2-201ENST00000394196 MAGEA9P43362 315 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 ST13P50502 369 aaKnown RBP10.13□□□□□ -0.79
CHD2-201ENST00000394196 FAM186BQ8IYM0 893 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 TEKT2Q9UIF3 430 aa10.13□□□□□ -0.79
CHD2-201ENST00000394196 SSRP1Q08945 709 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 MTMR3Q13615 1198 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 PDXDC1Q6P996 788 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 SSFA2P28290 1259 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 XPOTO43592 962 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms