RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 PALLDQ8WX93 1383 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 GNAQP50148 359 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 TMEM266Q2M3C6 531 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 BIN1O00499 593 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 CCDC183Q5T5S1 534 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 SEC31BQ9NQW1 1179 aa15.15■□□□□ 0.02
PTPRN2-202ENST00000389416 ALDH1B1P30837 517 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 A0A0U1RQG5 324 aaPredicted RBP15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 UBA7P41226 1012 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 GTF2IP78347 998 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 ZSCAN16Q9H4T2 348 aaPredicted RBP15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 WDHD1O75717 1129 aaPredicted RBP15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 CHRNDQ07001 517 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 SEC62Q99442 399 aaKnown RBP15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 SNX14Q9Y5W7 946 aa15.14■□□□□ 0.01
PTPRN2-202ENST00000389416 PNPLA6Q8IY17 1366 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 PDE8BO95263 885 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 TCP11L1Q9NUJ3 509 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 KCNQ2O43526 872 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 CNPY2Q9Y2B0 182 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 PDE6BP35913 854 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 DNM1Q05193 864 aaKnown RBP15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 SMARCE1Q969G3 411 aa15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
PTPRN2-202ENST00000389416 IDEP14735 1019 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 EIF6P56537 245 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 CCDC173Q0VFZ6 552 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 MFSD14BQ5SR56 506 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 ADORA1P30542 326 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 NAPAP54920 295 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 CFAP100Q494V2 611 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 ISM2Q6H9L7 571 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 IL27Q8NEV9 243 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 TLR7Q9NYK1 1049 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 SERPINB2P05120 415 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 PHKA1P46020 1223 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 UBA5Q9GZZ9 404 aa15.12■□□□□ 0.01
PTPRN2-202ENST00000389416 HLFQ16534 295 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 ZFYVE27Q5T4F4 411 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 C2CD5Q86YS7 1000 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 MAPKAPK5Q8IW41 473 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 A0A0D9SFI3 127 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 MARCKSP29966 332 aaPredicted RBP15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 TCP10Q12799 353 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 ANO10Q9NW15 660 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 BCS1LQ9Y276 419 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 RPS6KB1P23443 525 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 GRM1Q13255 1194 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 CERKQ8TCT0 537 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 NCOA5Q9HCD5 579 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 CTDSPL2Q05D32 466 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 RAB3GAP1Q15042 981 aa15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 DDX19AQ9NUU7 478 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 ZNHIT6Q9NWK9 470 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-202ENST00000389416 F13A1P00488 732 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 UBE2HP62256 183 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 SIRT2Q8IXJ6 389 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 SMTNL1A8MU46 457 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 CALM1P0DP23 149 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 CALM2P0DP24 149 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 CALM3P0DP25 149 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 WWC2Q6AWC2 1192 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 CCDC148Q8NFR7 591 aa15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
PTPRN2-202ENST00000389416 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 TGFBRAP1Q8WUH2 860 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 SAMM50Q9Y512 469 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 RTL9Q8NET4 1388 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 PDE6AP16499 860 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 PDCL3Q9H2J4 239 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 EHMT1Q9H9B1 1298 aa15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 TTF2Q9UNY4 1162 aaKnown RBP15.09■□□□□ 0.01
PTPRN2-202ENST00000389416 MYL10Q9BUA6 226 aa15.08■□□□□ 0.01
PTPRN2-202ENST00000389416 ANGEL1Q9UNK9 670 aaKnown RBP15.08■□□□□ 0.01
PTPRN2-202ENST00000389416 SYT1P21579 422 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 MATR3P43243 847 aaKnown RBP eCLIP15.08■□□□□ 08e-7■■■■□ 20.9
PTPRN2-202ENST00000389416 MNS1Q8NEH6 495 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 PTH1RQ03431 593 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms