RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 LRRC24Q50LG9 513 aa30.87■■■□□ 2.53
TNFRSF4-201ENST00000379236 MYH13Q9UKX3 1938 aa30.86■■■□□ 2.53
TNFRSF4-201ENST00000379236 GYG1P46976 350 aa30.86■■■□□ 2.53
TNFRSF4-201ENST00000379236 JAG2Q9Y219 1238 aa30.86■■■□□ 2.53
TNFRSF4-201ENST00000379236 PAPPA2Q9BXP8 1791 aa30.85■■■□□ 2.53
TNFRSF4-201ENST00000379236 F8W031 263 aaPredicted RBP30.85■■■□□ 2.53
TNFRSF4-201ENST00000379236 FKBP1AP62942 108 aaKnown RBP30.85■■■□□ 2.53
TNFRSF4-201ENST00000379236 KLHDC4Q8TBB5 520 aa30.85■■■□□ 2.53
TNFRSF4-201ENST00000379236 DLGAP5Q15398 846 aa30.84■■■□□ 2.53
TNFRSF4-201ENST00000379236 CAVIN4Q5BKX8 364 aa30.84■■■□□ 2.53
TNFRSF4-201ENST00000379236 RGMBQ6NW40 437 aa30.84■■■□□ 2.53
TNFRSF4-201ENST00000379236 SCAF8Q9UPN6 1271 aaKnown RBP30.84■■■□□ 2.53
TNFRSF4-201ENST00000379236 IPO8O15397 1037 aaKnown RBP30.83■■■□□ 2.53
TNFRSF4-201ENST00000379236 APOBEC3FQ8IUX4 373 aaKnown RBP30.83■■■□□ 2.53
TNFRSF4-201ENST00000379236 CERS5Q8N5B7 392 aa30.83■■■□□ 2.53
TNFRSF4-201ENST00000379236 ARHGAP45Q92619 1136 aa30.83■■■□□ 2.53
TNFRSF4-201ENST00000379236 FRAT2O75474 233 aaPredicted RBP30.82■■■□□ 2.52
TNFRSF4-201ENST00000379236 PDE8BO95263 885 aa30.82■■■□□ 2.52
TNFRSF4-201ENST00000379236 NF2P35240 595 aa30.82■■■□□ 2.52
TNFRSF4-201ENST00000379236 NOGQ13253 232 aa30.82■■■□□ 2.52
TNFRSF4-201ENST00000379236 PRDM10Q9NQV6 1147 aa30.82■■■□□ 2.52
TNFRSF4-201ENST00000379236 ZNF157P51786 506 aaPredicted RBP30.81■■■□□ 2.52
TNFRSF4-201ENST00000379236 TDRD7Q8NHU6 1098 aaKnown RBP30.81■■■□□ 2.52
TNFRSF4-201ENST00000379236 FRAT1Q92837 279 aaPredicted RBP30.81■■■□□ 2.52
TNFRSF4-201ENST00000379236 FAM84BQ96KN1 310 aaPredicted RBP30.81■■■□□ 2.52
TNFRSF4-201ENST00000379236 FAM205AQ6ZU69 1335 aa30.8■■■□□ 2.52
TNFRSF4-201ENST00000379236 MYO1BO43795 1136 aa30.8■■■□□ 2.52
TNFRSF4-201ENST00000379236 LBX1P52954 281 aa30.8■■■□□ 2.52
TNFRSF4-201ENST00000379236 FKBP1BP68106 108 aa30.8■■■□□ 2.52
TNFRSF4-201ENST00000379236 CCDC102AQ96A19 550 aa30.8■■■□□ 2.52
TNFRSF4-201ENST00000379236 EYA2O00167 538 aa30.79■■■□□ 2.52
TNFRSF4-201ENST00000379236 RBM5P52756 815 aaKnown RBP eCLIP30.79■■■□□ 2.52
TNFRSF4-201ENST00000379236 TTLL12Q14166 644 aaPredicted RBP30.79■■■□□ 2.52
TNFRSF4-201ENST00000379236 MFSD14BQ5SR56 506 aa30.79■■■□□ 2.52
TNFRSF4-201ENST00000379236 LRRFIP2Q9Y608 721 aaKnown RBP30.79■■■□□ 2.52
TNFRSF4-201ENST00000379236 IFIT1P09914 478 aaKnown RBP30.78■■■□□ 2.52
TNFRSF4-201ENST00000379236 PUM3Q15397 648 aaKnown RBP30.78■■■□□ 2.52
TNFRSF4-201ENST00000379236 AKAP11Q9UKA4 1901 aa30.77■■■□□ 2.52
TNFRSF4-201ENST00000379236 HSPA8P11142 646 aaKnown RBP30.77■■■□□ 2.52
TNFRSF4-201ENST00000379236 CFAP100Q494V2 611 aa30.77■■■□□ 2.52
TNFRSF4-201ENST00000379236 PRAMEF18Q5VWM3 479 aa30.77■■■□□ 2.52
TNFRSF4-201ENST00000379236 VGLL2Q8N8G2 317 aa30.77■■■□□ 2.52
TNFRSF4-201ENST00000379236 COL1A1P02452 1464 aaPredicted RBP30.76■■■□□ 2.52
TNFRSF4-201ENST00000379236 GNAI3P08754 354 aa30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 RFX5P48382 616 aaPredicted RBP30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 PTPN12Q05209 780 aaKnown RBP30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 INTS3Q68E01 1043 aaKnown RBP30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 MTMR14Q8NCE2 650 aa30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 MEIS3Q99687 375 aa30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 SIL1Q9H173 461 aa30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 IQSEC3Q9UPP2 1182 aaPredicted RBP30.76■■■□□ 2.51
TNFRSF4-201ENST00000379236 SLC5A1P13866 664 aa30.75■■■□□ 2.51
TNFRSF4-201ENST00000379236 CHAF1AQ13111 956 aaPredicted RBP30.75■■■□□ 2.51
TNFRSF4-201ENST00000379236 ZBED3Q96IU2 234 aaPredicted RBP30.75■■■□□ 2.51
TNFRSF4-201ENST00000379236 CA12O43570 354 aa30.74■■■□□ 2.51
TNFRSF4-201ENST00000379236 BCAR3O75815 825 aa30.74■■■□□ 2.51
TNFRSF4-201ENST00000379236 ATF7IPQ6VMQ6 1270 aa30.74■■■□□ 2.51
TNFRSF4-201ENST00000379236 FBXO33Q7Z6M2 555 aa30.74■■■□□ 2.51
TNFRSF4-201ENST00000379236 FBXO3Q9UK99 471 aa30.74■■■□□ 2.51
TNFRSF4-201ENST00000379236 TTF2Q9UNY4 1162 aaKnown RBP30.74■■■□□ 2.51
TNFRSF4-201ENST00000379236 SPDYE2BA6NHP3 402 aa30.72■■■□□ 2.51
TNFRSF4-201ENST00000379236 SPDYE6P0CI01 402 aa30.72■■■□□ 2.51
TNFRSF4-201ENST00000379236 TRIM27P14373 513 aa30.72■■■□□ 2.51
TNFRSF4-201ENST00000379236 TBC1D22AQ8WUA7 517 aa30.72■■■□□ 2.51
TNFRSF4-201ENST00000379236 VEZTQ9HBM0 779 aa30.72■■■□□ 2.51
TNFRSF4-201ENST00000379236 FAM155AB1AL88 458 aaPredicted RBP30.71■■■□□ 2.51
TNFRSF4-201ENST00000379236 CIAO1O76071 339 aa30.71■■■□□ 2.51
TNFRSF4-201ENST00000379236 SLC10A3P09131 477 aa30.71■■■□□ 2.51
TNFRSF4-201ENST00000379236 LPIN2Q92539 896 aa30.71■■■□□ 2.51
TNFRSF4-201ENST00000379236 CEP126Q9P2H0 1117 aa30.71■■■□□ 2.51
TNFRSF4-201ENST00000379236 CLRN2A0PK11 232 aa30.7■■■□□ 2.51
TNFRSF4-201ENST00000379236 BCAMP50895 628 aa30.7■■■□□ 2.51
TNFRSF4-201ENST00000379236 CLUAP1Q96AJ1 413 aa30.7■■■□□ 2.51
TNFRSF4-201ENST00000379236 SERPINA10Q9UK55 444 aa30.7■■■□□ 2.51
TNFRSF4-201ENST00000379236 PCDHAC2Q9Y5I4 1007 aa30.7■■■□□ 2.51
TNFRSF4-201ENST00000379236 KIF23Q02241 960 aaPredicted RBP30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 ZKSCAN2Q63HK3 967 aa30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 MOB2Q70IA6 237 aa30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 ARMC9Q7Z3E5 817 aa30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 PRMT6Q96LA8 375 aaPredicted RBP30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 DEFB129Q9H1M3 183 aa30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 TSKSQ9UJT2 592 aa30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 PPP2R3BQ9Y5P8 575 aa30.69■■■□□ 2.5
TNFRSF4-201ENST00000379236 UBE2Q2LH0YL09 131 aa30.68■■■□□ 2.5
TNFRSF4-201ENST00000379236 FGFR2P21802 821 aa30.68■■■□□ 2.5
TNFRSF4-201ENST00000379236 PRKG1Q13976 671 aa30.68■■■□□ 2.5
TNFRSF4-201ENST00000379236 ATG9AQ7Z3C6 839 aa30.68■■■□□ 2.5
TNFRSF4-201ENST00000379236 ZIC5Q96T25 663 aa30.68■■■□□ 2.5
TNFRSF4-201ENST00000379236 CAPN15O75808 1086 aa30.67■■■□□ 2.5
TNFRSF4-201ENST00000379236 IL15P40933 162 aaPredicted RBP30.67■■■□□ 2.5
TNFRSF4-201ENST00000379236 ATP2B3Q16720 1220 aa30.67■■■□□ 2.5
TNFRSF4-201ENST00000379236 RASAL3Q86YV0 1011 aa30.67■■■□□ 2.5
TNFRSF4-201ENST00000379236 ZBED9Q6R2W3 1325 aa30.67■■■□□ 2.5
TNFRSF4-201ENST00000379236 PA2G4Q9UQ80 394 aaKnown RBP30.66■■■□□ 2.5
TNFRSF4-201ENST00000379236 SRGAP3O43295 1099 aa30.65■■■□□ 2.5
TNFRSF4-201ENST00000379236 CRKP46108 304 aa30.65■■■□□ 2.5
TNFRSF4-201ENST00000379236 TNFAIP1Q13829 316 aa30.65■■■□□ 2.5
TNFRSF4-201ENST00000379236 GNAI2P04899 355 aa30.64■■■□□ 2.5
TNFRSF4-201ENST00000379236 REM2Q8IYK8 340 aaPredicted RBP30.64■■■□□ 2.5
TNFRSF4-201ENST00000379236 COPRSQ9NQ92 184 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms