RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PUM3Q15397 648 aaKnown RBP20.99■□□□□ 0.95
HMGN4-201ENST00000377575 CAVIN4Q5BKX8 364 aa20.99■□□□□ 0.95
HMGN4-201ENST00000377575 SAPCD2Q86UD0 394 aa20.99■□□□□ 0.95
HMGN4-201ENST00000377575 WDR33Q9C0J8 1336 aaKnown RBP20.99■□□□□ 0.95
HMGN4-201ENST00000377575 SASH1O94885 1247 aa20.98■□□□□ 0.95
HMGN4-201ENST00000377575 TDRD7Q8NHU6 1098 aaKnown RBP20.98■□□□□ 0.95
HMGN4-201ENST00000377575 HHIPL1Q96JK4 782 aa20.98■□□□□ 0.95
HMGN4-201ENST00000377575 FAM84BQ96KN1 310 aaPredicted RBP20.98■□□□□ 0.95
HMGN4-201ENST00000377575 FAM205AQ6ZU69 1335 aa20.98■□□□□ 0.95
HMGN4-201ENST00000377575 WNT10BO00744 389 aa20.97■□□□□ 0.95
HMGN4-201ENST00000377575 CIAO1O76071 339 aa20.97■□□□□ 0.95
HMGN4-201ENST00000377575 IFIT1P09914 478 aaKnown RBP20.97■□□□□ 0.95
HMGN4-201ENST00000377575 NBPF9Q3BBW0 867 aa20.97■□□□□ 0.95
HMGN4-201ENST00000377575 CERS5Q8N5B7 392 aa20.97■□□□□ 0.95
HMGN4-201ENST00000377575 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
HMGN4-201ENST00000377575 CAPNS2Q96L46 248 aa20.97■□□□□ 0.95
HMGN4-201ENST00000377575 PAPPA2Q9BXP8 1791 aa20.96■□□□□ 0.95
HMGN4-201ENST00000377575 FTSJ3Q8IY81 847 aaKnown RBP20.96■□□□□ 0.95
HMGN4-201ENST00000377575 SIL1Q9H173 461 aa20.96■□□□□ 0.95
HMGN4-201ENST00000377575 GBA2Q9HCG7 927 aaPredicted RBP20.96■□□□□ 0.95
HMGN4-201ENST00000377575 TNNQ9UQP3 1299 aa20.96■□□□□ 0.95
HMGN4-201ENST00000377575 JAG2Q9Y219 1238 aa20.96■□□□□ 0.95
HMGN4-201ENST00000377575 SLC5A1P13866 664 aa20.95■□□□□ 0.94
HMGN4-201ENST00000377575 MFSD14BQ5SR56 506 aa20.95■□□□□ 0.94
HMGN4-201ENST00000377575 CYP4F22Q6NT55 531 aa20.95■□□□□ 0.94
HMGN4-201ENST00000377575 FBXO33Q7Z6M2 555 aa20.95■□□□□ 0.94
HMGN4-201ENST00000377575 C2orf69Q8N8R5 385 aa20.95■□□□□ 0.94
HMGN4-201ENST00000377575 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
HMGN4-201ENST00000377575 F8W031 263 aaPredicted RBP20.94■□□□□ 0.94
HMGN4-201ENST00000377575 FRAT2O75474 233 aaPredicted RBP20.94■□□□□ 0.94
HMGN4-201ENST00000377575 GNAI2P04899 355 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 GRM1Q13255 1194 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 DLGAP5Q15398 846 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 DLK2Q6UY11 383 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 ATG9AQ7Z3C6 839 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 APOBEC3FQ8IUX4 373 aaKnown RBP20.94■□□□□ 0.94
HMGN4-201ENST00000377575 LPIN2Q92539 896 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 AIDAQ96BJ3 306 aa20.94■□□□□ 0.94
HMGN4-201ENST00000377575 COL1A1P02452 1464 aaPredicted RBP20.94■□□□□ 0.94
HMGN4-201ENST00000377575 SRGAP3O43295 1099 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 FGFR2P21802 821 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 IL15P40933 162 aaPredicted RBP20.93■□□□□ 0.94
HMGN4-201ENST00000377575 HUNKP57058 714 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 MTX1Q13505 466 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 TMEM57Q8N5G2 664 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 MTMR14Q8NCE2 650 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 ZBED3Q96IU2 234 aaPredicted RBP20.93■□□□□ 0.94
HMGN4-201ENST00000377575 COPRSQ9NQ92 184 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 CEP126Q9P2H0 1117 aa20.93■□□□□ 0.94
HMGN4-201ENST00000377575 MYO1BO43795 1136 aa20.92■□□□□ 0.94
HMGN4-201ENST00000377575 MAP2K1Q02750 393 aaPredicted RBP20.92■□□□□ 0.94
HMGN4-201ENST00000377575 TBC1D22AQ8WUA7 517 aa20.92■□□□□ 0.94
HMGN4-201ENST00000377575 CFAP100Q494V2 611 aa20.91■□□□□ 0.94
HMGN4-201ENST00000377575 DZIP1LQ8IYY4 767 aaKnown RBP20.91■□□□□ 0.94
HMGN4-201ENST00000377575 IQSEC3Q9UPP2 1182 aaPredicted RBP20.91■□□□□ 0.94
HMGN4-201ENST00000377575 PA2G4Q9UQ80 394 aaKnown RBP20.91■□□□□ 0.94
HMGN4-201ENST00000377575 BCAMP50895 628 aa20.9■□□□□ 0.94
HMGN4-201ENST00000377575 FKBP1BP68106 108 aa20.9■□□□□ 0.94
HMGN4-201ENST00000377575 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
HMGN4-201ENST00000377575 ATP2B3Q16720 1220 aa20.9■□□□□ 0.94
HMGN4-201ENST00000377575 TTF2Q9UNY4 1162 aaKnown RBP20.9■□□□□ 0.94
HMGN4-201ENST00000377575 SPDYE2BA6NHP3 402 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 SPDYE6P0CI01 402 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 NF2P35240 595 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 MAP2K2P36507 400 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 RBM5P52756 815 aaKnown RBP eCLIP20.89■□□□□ 0.93
HMGN4-201ENST00000377575 ITPRIPQ8IWB1 547 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 WBP1LQ9NX94 342 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 SERPINA10Q9UK55 444 aa20.89■□□□□ 0.93
HMGN4-201ENST00000377575 SCAF8Q9UPN6 1271 aaKnown RBP20.89■□□□□ 0.93
HMGN4-201ENST00000377575 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
HMGN4-201ENST00000377575 RGMBQ6NW40 437 aa20.88■□□□□ 0.93
HMGN4-201ENST00000377575 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
HMGN4-201ENST00000377575 NOGQ13253 232 aa20.87■□□□□ 0.93
HMGN4-201ENST00000377575 BEGAINQ9BUH8 593 aa20.87■□□□□ 0.93
HMGN4-201ENST00000377575 GNL3LQ9NVN8 582 aaKnown RBP20.87■□□□□ 0.93
HMGN4-201ENST00000377575 MAST3O60307 1309 aa20.86■□□□□ 0.93
HMGN4-201ENST00000377575 FOXN1O15353 648 aa20.86■□□□□ 0.93
HMGN4-201ENST00000377575 AOC2O75106 756 aa20.86■□□□□ 0.93
HMGN4-201ENST00000377575 SUGT1Q9Y2Z0 365 aa20.86■□□□□ 0.93
HMGN4-201ENST00000377575 PPP2R3BQ9Y5P8 575 aa20.86■□□□□ 0.93
HMGN4-201ENST00000377575 CTCFP49711 727 aaPredicted RBP20.85■□□□□ 0.93
HMGN4-201ENST00000377575 ZNF157P51786 506 aaPredicted RBP20.85■□□□□ 0.93
HMGN4-201ENST00000377575 CCDC102AQ96A19 550 aa20.85■□□□□ 0.93
HMGN4-201ENST00000377575 PRMT6Q96LA8 375 aaPredicted RBP20.85■□□□□ 0.93
HMGN4-201ENST00000377575 VEZTQ9HBM0 779 aa20.85■□□□□ 0.93
HMGN4-201ENST00000377575 AKAP2Q9Y2D5 859 aa20.85■□□□□ 0.93
HMGN4-201ENST00000377575 PCDHAC2Q9Y5I4 1007 aa20.85■□□□□ 0.93
HMGN4-201ENST00000377575 CLRN2A0PK11 232 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 MS4A1P11836 297 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 RLBP1P12271 317 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 CRKP46108 304 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 HDLBPQ00341 1268 aaKnown RBP20.84■□□□□ 0.93
HMGN4-201ENST00000377575 TTLL12Q14166 644 aaPredicted RBP20.84■□□□□ 0.93
HMGN4-201ENST00000377575 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 WDR66Q8TBY9 1149 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 DEFB129Q9H1M3 183 aa20.84■□□□□ 0.93
HMGN4-201ENST00000377575 PNMA6EA0A0J9YXQ4 647 aa20.83■□□□□ 0.93
HMGN4-201ENST00000377575 TNFAIP1Q13829 316 aa20.83■□□□□ 0.93
HMGN4-201ENST00000377575 TEKT1Q969V4 418 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms