RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PRPF38AQ8NAV1 312 aaKnown RBP17.98■□□□□ 0.47
FXN-201ENST00000377270 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 NPHP1O15259 732 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
FXN-201ENST00000377270 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
FXN-201ENST00000377270 FAXDC2Q96IV6 333 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 SLC24A3Q9HC58 644 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 COPRSQ9NQ92 184 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 HIP1O00291 1037 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 CAND2O75155 1236 aa17.97■□□□□ 0.47
FXN-201ENST00000377270 CTAGE5O15320 804 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 PTPN12Q05209 780 aaKnown RBP17.96■□□□□ 0.47
FXN-201ENST00000377270 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 IQUBQ8NA54 791 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 ERO1AQ96HE7 468 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 JAKMIP1Q96N16 626 aaKnown RBP17.96■□□□□ 0.47
FXN-201ENST00000377270 FSD1Q9BTV5 496 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 NBPF26B4DH59 902 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 IPO7O95373 1038 aaKnown RBP17.96■□□□□ 0.47
FXN-201ENST00000377270 RFX5P48382 616 aaPredicted RBP17.96■□□□□ 0.47
FXN-201ENST00000377270 TMEM132AQ24JP5 1023 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 NBPF14Q5TI25 921 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 CCDC186Q7Z3E2 898 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 NBPF15Q8N660 670 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
FXN-201ENST00000377270 CCDC192P0DO97 292 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 DNAJC14Q6Y2X3 702 aaPredicted RBP17.95■□□□□ 0.46
FXN-201ENST00000377270 NUCKS1Q9H1E3 243 aaKnown RBP17.95■□□□□ 0.46
FXN-201ENST00000377270 ANKRD33BA6NCL7 494 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 NEBLO76041 1014 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 SMC2O95347 1197 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 H2AFXP16104 143 aaPredicted RBP17.95■□□□□ 0.46
FXN-201ENST00000377270 TFCP2Q12800 502 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
FXN-201ENST00000377270 DDX54Q8TDD1 881 aaKnown RBP17.95■□□□□ 0.46
FXN-201ENST00000377270 ZCCHC17Q9NP64 241 aaKnown RBP17.95■□□□□ 0.46
FXN-201ENST00000377270 IRAK4Q9NWZ3 460 aa17.95■□□□□ 0.46
FXN-201ENST00000377270 TPM1P09493 284 aa17.94■□□□□ 0.46
FXN-201ENST00000377270 LRMPQ12912 555 aa17.94■□□□□ 0.46
FXN-201ENST00000377270 MTA1Q13330 715 aa17.94■□□□□ 0.46
FXN-201ENST00000377270 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
FXN-201ENST00000377270 RBM8AQ9Y5S9 174 aaKnown RBP17.94■□□□□ 0.46
FXN-201ENST00000377270 ZSCAN22P10073 491 aaPredicted RBP17.94■□□□□ 0.46
FXN-201ENST00000377270 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
FXN-201ENST00000377270 AK7Q96M32 723 aa17.94■□□□□ 0.46
FXN-201ENST00000377270 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
FXN-201ENST00000377270 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 TNNI3KQ59H18 835 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 FAM200AQ8TCP9 573 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 KCNB2Q92953 911 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 PAIP2Q9BPZ3 127 aaKnown RBP17.93■□□□□ 0.46
FXN-201ENST00000377270 CYP46A1Q9Y6A2 500 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
FXN-201ENST00000377270 A0A0D9SFI3 127 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 A1BGP04217 495 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 CLCN6P51797 869 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 TPD52L1Q16890 204 aaPredicted RBP17.93■□□□□ 0.46
FXN-201ENST00000377270 TTLL7Q6ZT98 887 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 REXO1L1PQ8IX06 675 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 MAP4K1Q92918 833 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 EDC3Q96F86 508 aaKnown RBP17.93■□□□□ 0.46
FXN-201ENST00000377270 ZSCAN16Q9H4T2 348 aaPredicted RBP17.93■□□□□ 0.46
FXN-201ENST00000377270 ZSWIM6Q9HCJ5 1215 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 STRN4Q9NRL3 753 aa17.93■□□□□ 0.46
FXN-201ENST00000377270 DBNLQ9UJU6 430 aaKnown RBP17.93■□□□□ 0.46
FXN-201ENST00000377270 XIRP1Q702N8 1843 aaKnown RBP17.92■□□□□ 0.46
FXN-201ENST00000377270 ACTN2P35609 894 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 LMAN1P49257 510 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 MNAT1P51948 309 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 CASP7P55210 303 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 CCDC96Q2M329 555 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 LMBR1LQ6UX01 489 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 MIEF2Q96C03 454 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 TM6SF1Q9BZW5 370 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 CHMP3Q9Y3E7 222 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 FIBPO43427 364 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 CPP00450 1065 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 IL2RBP14784 551 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 C1QTNF12Q5T7M4 302 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 JAKMIP3Q5VZ66 844 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 ATP6V1DQ9Y5K8 247 aa17.92■□□□□ 0.46
FXN-201ENST00000377270 AFDNP55196 1824 aaKnown RBP17.92■□□□□ 0.46
FXN-201ENST00000377270 CORO7P57737 925 aa17.91■□□□□ 0.46
FXN-201ENST00000377270 IRX1P78414 480 aaPredicted RBP17.91■□□□□ 0.46
FXN-201ENST00000377270 ANKRD23Q86SG2 305 aa17.91■□□□□ 0.46
FXN-201ENST00000377270 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
FXN-201ENST00000377270 LARGE1O95461 756 aa17.91■□□□□ 0.46
FXN-201ENST00000377270 EVA1CP58658 441 aa17.91■□□□□ 0.46
FXN-201ENST00000377270 SMC3Q9UQE7 1217 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms