RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 FBXO3Q9UK99 471 aa28.3■■■□□ 2.12
COL9A2-201ENST00000372736 FAM205AQ6ZU69 1335 aa28.29■■■□□ 2.12
COL9A2-201ENST00000372736 CIAO1O76071 339 aa28.29■■■□□ 2.12
COL9A2-201ENST00000372736 SASH1O94885 1247 aa28.29■■■□□ 2.12
COL9A2-201ENST00000372736 NBPF9Q3BBW0 867 aa28.29■■■□□ 2.12
COL9A2-201ENST00000372736 FBXO33Q7Z6M2 555 aa28.29■■■□□ 2.12
COL9A2-201ENST00000372736 SULF1Q8IWU6 871 aa28.29■■■□□ 2.12
COL9A2-201ENST00000372736 WNT10BO00744 389 aa28.28■■■□□ 2.12
COL9A2-201ENST00000372736 MTX1Q13505 466 aa28.28■■■□□ 2.12
COL9A2-201ENST00000372736 HDAC9Q9UKV0 1011 aa28.28■■■□□ 2.12
COL9A2-201ENST00000372736 PA2G4Q9UQ80 394 aaKnown RBP28.28■■■□□ 2.12
COL9A2-201ENST00000372736 SAPCD2Q86UD0 394 aa28.27■■■□□ 2.12
COL9A2-201ENST00000372736 ZBED3Q96IU2 234 aaPredicted RBP28.27■■■□□ 2.12
COL9A2-201ENST00000372736 COPRSQ9NQ92 184 aa28.27■■■□□ 2.12
COL9A2-201ENST00000372736 ECM29Q5VYK3 1845 aa28.27■■■□□ 2.12
COL9A2-201ENST00000372736 GNAI2P04899 355 aa28.25■■■□□ 2.11
COL9A2-201ENST00000372736 RLBP1P12271 317 aa28.25■■■□□ 2.11
COL9A2-201ENST00000372736 VPS37DQ86XT2 251 aa28.25■■■□□ 2.11
COL9A2-201ENST00000372736 WDR33Q9C0J8 1336 aaKnown RBP28.24■■■□□ 2.11
COL9A2-201ENST00000372736 MYH13Q9UKX3 1938 aa28.24■■■□□ 2.11
COL9A2-201ENST00000372736 SRGAP3O43295 1099 aa28.24■■■□□ 2.11
COL9A2-201ENST00000372736 IFIT1P09914 478 aaKnown RBP28.24■■■□□ 2.11
COL9A2-201ENST00000372736 CAVIN4Q5BKX8 364 aa28.24■■■□□ 2.11
COL9A2-201ENST00000372736 FTSJ3Q8IY81 847 aaKnown RBP28.24■■■□□ 2.11
COL9A2-201ENST00000372736 DZIP1LQ8IYY4 767 aaKnown RBP28.24■■■□□ 2.11
COL9A2-201ENST00000372736 CDCA5Q96FF9 252 aa28.24■■■□□ 2.11
COL9A2-201ENST00000372736 F8W031 263 aaPredicted RBP28.23■■■□□ 2.11
COL9A2-201ENST00000372736 HSPA1AP0DMV8 641 aaKnown RBP28.23■■■□□ 2.11
COL9A2-201ENST00000372736 HSPA1BP0DMV9 641 aaKnown RBP28.23■■■□□ 2.11
COL9A2-201ENST00000372736 BCAMP50895 628 aa28.23■■■□□ 2.11
COL9A2-201ENST00000372736 MFSD14BQ5SR56 506 aa28.23■■■□□ 2.11
COL9A2-201ENST00000372736 LPIN2Q92539 896 aa28.23■■■□□ 2.11
COL9A2-201ENST00000372736 SCAF8Q9UPN6 1271 aaKnown RBP28.23■■■□□ 2.11
COL9A2-201ENST00000372736 IQSEC3Q9UPP2 1182 aaPredicted RBP28.23■■■□□ 2.11
COL9A2-201ENST00000372736 SLC5A1P13866 664 aa28.22■■■□□ 2.11
COL9A2-201ENST00000372736 IL15P40933 162 aaPredicted RBP28.22■■■□□ 2.11
COL9A2-201ENST00000372736 MTMR14Q8NCE2 650 aa28.22■■■□□ 2.11
COL9A2-201ENST00000372736 HHIPL1Q96JK4 782 aa28.22■■■□□ 2.11
COL9A2-201ENST00000372736 CAPNS2Q96L46 248 aa28.22■■■□□ 2.11
COL9A2-201ENST00000372736 CYP4F22Q6NT55 531 aa28.21■■■□□ 2.11
COL9A2-201ENST00000372736 PAXIP1Q6ZW49 1069 aaPredicted RBP28.21■■■□□ 2.11
COL9A2-201ENST00000372736 GBA2Q9HCG7 927 aaPredicted RBP28.21■■■□□ 2.11
COL9A2-201ENST00000372736 CEP126Q9P2H0 1117 aa28.21■■■□□ 2.11
COL9A2-201ENST00000372736 PCDHAC2Q9Y5I4 1007 aa28.21■■■□□ 2.11
COL9A2-201ENST00000372736 ATP2B3Q16720 1220 aa28.2■■■□□ 2.1
COL9A2-201ENST00000372736 PAPPA2Q9BXP8 1791 aa28.19■■■□□ 2.1
COL9A2-201ENST00000372736 ECE1P42892 770 aa28.19■■■□□ 2.1
COL9A2-201ENST00000372736 DLGAP5Q15398 846 aa28.19■■■□□ 2.1
COL9A2-201ENST00000372736 ITPRIPQ8IWB1 547 aa28.19■■■□□ 2.1
COL9A2-201ENST00000372736 COL1A1P02452 1464 aaPredicted RBP28.19■■■□□ 2.1
COL9A2-201ENST00000372736 PNMA6EA0A0J9YXQ4 647 aa28.18■■■□□ 2.1
COL9A2-201ENST00000372736 CHAF1AQ13111 956 aaPredicted RBP28.18■■■□□ 2.1
COL9A2-201ENST00000372736 CFAP100Q494V2 611 aa28.18■■■□□ 2.1
COL9A2-201ENST00000372736 SPDYE2BA6NHP3 402 aa28.17■■■□□ 2.1
COL9A2-201ENST00000372736 SPDYE6P0CI01 402 aa28.17■■■□□ 2.1
COL9A2-201ENST00000372736 HUNKP57058 714 aa28.17■■■□□ 2.1
COL9A2-201ENST00000372736 AOX1Q06278 1338 aa28.17■■■□□ 2.1
COL9A2-201ENST00000372736 FRAT2O75474 233 aaPredicted RBP28.16■■■□□ 2.1
COL9A2-201ENST00000372736 GRM1Q13255 1194 aa28.16■■■□□ 2.1
COL9A2-201ENST00000372736 GRIK5Q16478 980 aa28.16■■■□□ 2.1
COL9A2-201ENST00000372736 APOBEC3FQ8IUX4 373 aaKnown RBP28.16■■■□□ 2.1
COL9A2-201ENST00000372736 C2orf69Q8N8R5 385 aa28.16■■■□□ 2.1
COL9A2-201ENST00000372736 TTF2Q9UNY4 1162 aaKnown RBP28.16■■■□□ 2.1
COL9A2-201ENST00000372736 PANK1Q8TE04 598 aa28.15■■■□□ 2.1
COL9A2-201ENST00000372736 TBC1D22AQ8WUA7 517 aa28.15■■■□□ 2.1
COL9A2-201ENST00000372736 ZBTB7BO15156 539 aaPredicted RBP28.14■■■□□ 2.1
COL9A2-201ENST00000372736 PRAMEF18Q5VWM3 479 aa28.14■■■□□ 2.1
COL9A2-201ENST00000372736 PRMT6Q96LA8 375 aaPredicted RBP28.14■■■□□ 2.1
COL9A2-201ENST00000372736 C1orf115Q9H7X2 142 aa28.14■■■□□ 2.1
COL9A2-201ENST00000372736 SERPINA10Q9UK55 444 aa28.14■■■□□ 2.1
COL9A2-201ENST00000372736 WBP1LQ9NX94 342 aa28.13■■■□□ 2.09
COL9A2-201ENST00000372736 AOC2O75106 756 aa28.12■■■□□ 2.09
COL9A2-201ENST00000372736 ADORA1P30542 326 aa28.12■■■□□ 2.09
COL9A2-201ENST00000372736 TFCP2Q12800 502 aa28.12■■■□□ 2.09
COL9A2-201ENST00000372736 POLA2Q14181 598 aa28.12■■■□□ 2.09
COL9A2-201ENST00000372736 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.12■■■□□ 2.09
COL9A2-201ENST00000372736 CLRN2A0PK11 232 aa28.11■■■□□ 2.09
COL9A2-201ENST00000372736 RBM5P52756 815 aaKnown RBP eCLIP28.11■■■□□ 2.09
COL9A2-201ENST00000372736 RCAN3Q9UKA8 241 aa28.11■■■□□ 2.09
COL9A2-201ENST00000372736 MYO1BO43795 1136 aa28.1■■■□□ 2.09
COL9A2-201ENST00000372736 PHKA1P46020 1223 aa28.1■■■□□ 2.09
COL9A2-201ENST00000372736 FKBP1BP68106 108 aa28.1■■■□□ 2.09
COL9A2-201ENST00000372736 RGMBQ6NW40 437 aa28.1■■■□□ 2.09
COL9A2-201ENST00000372736 SSH3Q8TE77 659 aa28.1■■■□□ 2.09
COL9A2-201ENST00000372736 FOXN1O15353 648 aa28.09■■■□□ 2.09
COL9A2-201ENST00000372736 MAP2K2P36507 400 aa28.09■■■□□ 2.09
COL9A2-201ENST00000372736 CRKP46108 304 aa28.09■■■□□ 2.09
COL9A2-201ENST00000372736 A0A1B0GUL7 405 aa28.08■■■□□ 2.09
COL9A2-201ENST00000372736 TIMM10P62072 90 aa28.08■■■□□ 2.09
COL9A2-201ENST00000372736 ATP8B2P98198 1209 aa28.08■■■□□ 2.09
COL9A2-201ENST00000372736 MAP2K1Q02750 393 aaPredicted RBP28.08■■■□□ 2.09
COL9A2-201ENST00000372736 WDR66Q8TBY9 1149 aa28.08■■■□□ 2.09
COL9A2-201ENST00000372736 DEFB129Q9H1M3 183 aa28.08■■■□□ 2.09
COL9A2-201ENST00000372736 GNL3LQ9NVN8 582 aaKnown RBP28.08■■■□□ 2.09
COL9A2-201ENST00000372736 SUGT1Q9Y2Z0 365 aa28.08■■■□□ 2.09
COL9A2-201ENST00000372736 SSC5DA1L4H1 1573 aa28.07■■■□□ 2.08
COL9A2-201ENST00000372736 FAM155AB1AL88 458 aaPredicted RBP28.07■■■□□ 2.08
COL9A2-201ENST00000372736 ZBTB22O15209 634 aa28.07■■■□□ 2.08
COL9A2-201ENST00000372736 HDLBPQ00341 1268 aaKnown RBP28.07■■■□□ 2.08
COL9A2-201ENST00000372736 SPDYE2Q495Y8 402 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms