RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PPP2R2CQ9Y2T4 447 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 KINO60870 393 aaKnown RBP13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 WDHD1O75717 1129 aaPredicted RBP13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 SUCLG2Q96I99 432 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 MED15Q96RN5 788 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 GEMIN8Q9NWZ8 242 aaKnown RBP13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 RPS6KA5O75582 802 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 LTN1O94822 1766 aa13.54□□□□□ -0.24
SMARCA1-201ENST00000371121 KIF28PB7ZC32 967 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 MRPL44Q9H9J2 332 aaKnown RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 RTEL1Q9NZ71 1219 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 EIF2S2P20042 333 aaKnown RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 ME1P48163 572 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 LMAN1P49257 510 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 ICE2Q659A1 982 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 HMG20BQ9P0W2 317 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 C5P01031 1676 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 H3BQV1 296 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 ABL1P00519 1130 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 NLRP12P59046 1061 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 PPP2R3AQ06190 1150 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 PDE4BQ07343 736 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 MTF1Q14872 753 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 IFFO2Q5TF58 517 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 TC2NQ8N9U0 490 aa13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
SMARCA1-201ENST00000371121 PSEN1P49768 467 aa13.52□□□□□ -0.24
SMARCA1-201ENST00000371121 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.24
SMARCA1-201ENST00000371121 TEX35Q5T0J7 233 aa13.52□□□□□ -0.24
SMARCA1-201ENST00000371121 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.24
SMARCA1-201ENST00000371121 UTYO14607 1347 aa13.52□□□□□ -0.24
SMARCA1-201ENST00000371121 A0A1W2PQ27 194 aa13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 A0A1W2PQ64 194 aa13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 A0A1W2PQD8 194 aa13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 LRRC31Q6UY01 552 aa13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 PTPRUQ92729 1446 aa13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 TUBB4AP04350 444 aa13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 SRRTQ9BXP5 876 aaKnown RBP13.52□□□□□ -0.25
SMARCA1-201ENST00000371121 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 USP5P45974 858 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 EPHA10Q5JZY3 1008 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 CCDC73Q6ZRK6 1079 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 FSD1Q9BTV5 496 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 PLEKHA4Q9H4M7 779 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 ARGLU1Q9NWB6 273 aaPredicted RBP13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 L1RE1Q9UN81 338 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 RAB21Q9UL25 225 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 IKBKBO14920 756 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 ZNF202O95125 648 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
SMARCA1-201ENST00000371121 EIF3CLB5ME19 914 aaKnown RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 TXLNAP40222 546 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 EIF3CQ99613 913 aaKnown RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 DESI2Q9BSY9 194 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 ARFGAP3Q9NP61 516 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 SLIT1O75093 1534 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 FOXP2O15409 715 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 GUCY2CP25092 1073 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 FAN1Q9Y2M0 1017 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 PFKFB1P16118 471 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 MMP14P50281 582 aa13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 HNRNPLLQ8WVV9 542 aaKnown RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 NAT10Q9H0A0 1025 aaKnown RBP13.5□□□□□ -0.25
SMARCA1-201ENST00000371121 ADAMTS13Q76LX8 1427 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 DIP2BQ9P265 1576 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 CCDC151A5D8V7 595 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
SMARCA1-201ENST00000371121 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms