RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
RTCA-203ENST00000370128 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
RTCA-203ENST00000370128 DHX32Q7L7V1 743 aaKnown RBP20.28■□□□□ 0.84
RTCA-203ENST00000370128 CEP120Q8N960 986 aa20.28■□□□□ 0.84
RTCA-203ENST00000370128 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.28■□□□□ 0.84
RTCA-203ENST00000370128 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
RTCA-203ENST00000370128 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
RTCA-203ENST00000370128 ISCA1Q9BUE6 129 aa20.28■□□□□ 0.84
RTCA-203ENST00000370128 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
RTCA-203ENST00000370128 CCDC192P0DO97 292 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 HSPD1P10809 573 aaKnown RBP20.27■□□□□ 0.84
RTCA-203ENST00000370128 SMARCC2Q8TAQ2 1214 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 NUP62CLQ9H1M0 184 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 ST7Q9NRC1 585 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 PFKFB2O60825 505 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 RESTQ13127 1097 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
RTCA-203ENST00000370128 MAST3O60307 1309 aa20.27■□□□□ 0.83
RTCA-203ENST00000370128 A0A0G2JLW4 131 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 GOLGA6L6A8MZA4 724 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 NAA30Q147X3 362 aaPredicted RBP20.26■□□□□ 0.83
RTCA-203ENST00000370128 DACT1Q9NYF0 836 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 RNF113AO15541 343 aaKnown RBP20.26■□□□□ 0.83
RTCA-203ENST00000370128 AP5Z1O43299 807 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 EXOSC10Q01780 885 aaKnown RBP20.26■□□□□ 0.83
RTCA-203ENST00000370128 CAMK4Q16566 473 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 KMT5BQ4FZB7 885 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 AGXT2Q9BYV1 514 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 ZNF446Q9NWS9 450 aa20.26■□□□□ 0.83
RTCA-203ENST00000370128 TPM3P06753 285 aa20.25■□□□□ 0.83
RTCA-203ENST00000370128 TCIRG1Q13488 830 aa20.25■□□□□ 0.83
RTCA-203ENST00000370128 TMED8Q6PL24 325 aaPredicted RBP20.25■□□□□ 0.83
RTCA-203ENST00000370128 LLPHQ9BRT6 129 aaKnown RBP20.25■□□□□ 0.83
RTCA-203ENST00000370128 KCNF1Q9H3M0 494 aa20.25■□□□□ 0.83
RTCA-203ENST00000370128 GOLGA6L4A6NEF3 574 aa20.25■□□□□ 0.83
RTCA-203ENST00000370128 GYS2P54840 703 aa20.25■□□□□ 0.83
RTCA-203ENST00000370128 E7EWF7 191 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 H3BQV1 296 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 RBM6P78332 1123 aaKnown RBP20.24■□□□□ 0.83
RTCA-203ENST00000370128 IFFO2Q5TF58 517 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 NSUN7Q8NE18 718 aaKnown RBP20.24■□□□□ 0.83
RTCA-203ENST00000370128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.24■□□□□ 0.83
RTCA-203ENST00000370128 PGBD1Q96JS3 809 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 STRN4Q9NRL3 753 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 CEP126Q9P2H0 1117 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 SPEF2Q9C093 1822 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 APOBRQ0VD83 1088 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 CCDC57Q2TAC2 916 aa20.24■□□□□ 0.83
RTCA-203ENST00000370128 ZSCAN16Q9H4T2 348 aaPredicted RBP20.24■□□□□ 0.83
RTCA-203ENST00000370128 MYO1CO00159 1063 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 CTDNEP1O95476 244 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 M0R2C6 588 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 TYRO3Q06418 890 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 TNMDQ9H2S6 317 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 SLAIN2Q9P270 581 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 MRVI1Q9Y6F6 885 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 TOGARAM1Q9Y4F4 1720 aa20.23■□□□□ 0.83
RTCA-203ENST00000370128 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
RTCA-203ENST00000370128 SATB1Q01826 763 aa20.22■□□□□ 0.83
RTCA-203ENST00000370128 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
RTCA-203ENST00000370128 RBM43Q6ZSC3 357 aaKnown RBP20.22■□□□□ 0.83
RTCA-203ENST00000370128 C10orf67Q8IYJ2 551 aa20.22■□□□□ 0.83
RTCA-203ENST00000370128 OSBP2Q969R2 916 aa20.22■□□□□ 0.83
RTCA-203ENST00000370128 DDX19AQ9NUU7 478 aaKnown RBP20.22■□□□□ 0.83
RTCA-203ENST00000370128 TMOD3Q9NYL9 352 aa20.22■□□□□ 0.83
RTCA-203ENST00000370128 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
RTCA-203ENST00000370128 FKBP4Q02790 459 aaKnown RBP eCLIP20.22■□□□□ 0.83
RTCA-203ENST00000370128 FAM200AQ8TCP9 573 aa20.22■□□□□ 0.83
RTCA-203ENST00000370128 TRIM66O15016 1216 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 ADORA1P30542 326 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 CKAP2LQ8IYA6 745 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 GPATCH11Q8N954 259 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 FBXO3Q9UK99 471 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 ABCA3Q99758 1704 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 NR1I2O75469 434 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 TTLL5Q6EMB2 1281 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 XAGE2Q96GT9 111 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 CLSTN2Q9H4D0 955 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 PAXBP1Q9Y5B6 917 aa20.21■□□□□ 0.83
RTCA-203ENST00000370128 PTPDC1A2A3K4 754 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
RTCA-203ENST00000370128 CCDC158Q5M9N0 1113 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 NAA16Q6N069 864 aaPredicted RBP20.2■□□□□ 0.82
RTCA-203ENST00000370128 CCDC112Q8NEF3 446 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 PCCAP05165 728 aaPredicted RBP20.2■□□□□ 0.82
RTCA-203ENST00000370128 ADD1P35611 737 aaKnown RBP20.2■□□□□ 0.82
RTCA-203ENST00000370128 EVA1CP58658 441 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 TXLNBQ8N3L3 684 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 CCDC85AQ96PX6 553 aaPredicted RBP20.2■□□□□ 0.82
RTCA-203ENST00000370128 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 CFAP45Q9UL16 551 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
RTCA-203ENST00000370128 SALL1Q9NSC2 1324 aa20.19■□□□□ 0.82
RTCA-203ENST00000370128 TTC39AQ5SRH9 613 aa20.19■□□□□ 0.82
RTCA-203ENST00000370128 DNAJC10Q8IXB1 793 aa20.19■□□□□ 0.82
RTCA-203ENST00000370128 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms