RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 CCDC8Q9H0W5 538 aaPredicted RBP18.67■□□□□ 0.58
CHD1L-203ENST00000369259 SF3A1Q15459 793 aaKnown RBP18.66■□□□□ 0.58
CHD1L-203ENST00000369259 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
CHD1L-203ENST00000369259 EYA1Q99502 592 aa18.66■□□□□ 0.58
CHD1L-203ENST00000369259 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
CHD1L-203ENST00000369259 DEF6Q9H4E7 631 aa18.66■□□□□ 0.58
CHD1L-203ENST00000369259 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
CHD1L-203ENST00000369259 LINC00301Q8NCQ3 95 aa18.65■□□□□ 0.58
CHD1L-203ENST00000369259 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
CHD1L-203ENST00000369259 USP31Q70CQ4 1352 aa18.65■□□□□ 0.58
CHD1L-203ENST00000369259 POTEB2H3BUK9 544 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 ZNF202O95125 648 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 EIF2S2P20042 333 aaKnown RBP18.64■□□□□ 0.58
CHD1L-203ENST00000369259 USP5P45974 858 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 GUCY1B3Q02153 619 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.58
CHD1L-203ENST00000369259 FAN1Q9Y2M0 1017 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 PRR36Q9H6K5 1346 aa18.64■□□□□ 0.58
CHD1L-203ENST00000369259 SASH1O94885 1247 aa18.64■□□□□ 0.57
CHD1L-203ENST00000369259 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
CHD1L-203ENST00000369259 STK38Q15208 465 aa18.64■□□□□ 0.57
CHD1L-203ENST00000369259 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.57
CHD1L-203ENST00000369259 KCNG4Q8TDN1 519 aa18.64■□□□□ 0.57
CHD1L-203ENST00000369259 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
CHD1L-203ENST00000369259 ERLIN1O75477 346 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 SRGAP1Q7Z6B7 1085 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 ANKZF1Q9H8Y5 726 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 TLR7Q9NYK1 1049 aaKnown RBP18.63■□□□□ 0.57
CHD1L-203ENST00000369259 RAB21Q9UL25 225 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.63■□□□□ 0.57
CHD1L-203ENST00000369259 STX10O60499 249 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 N4BP1O75113 896 aaKnown RBP18.63■□□□□ 0.57
CHD1L-203ENST00000369259 MYL5Q02045 173 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
CHD1L-203ENST00000369259 L1RE1Q9UN81 338 aa18.63■□□□□ 0.57
CHD1L-203ENST00000369259 TMEM232C9JQI7 657 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CYP21A2P08686 494 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.572e-7■□□□□ 8.3
CHD1L-203ENST00000369259 LRRC31Q6UY01 552 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 TOGARAM2Q6ZUX3 1019 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 SUGP1Q8IWZ8 645 aaKnown RBP18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CCDC12Q8WUD4 166 aaPredicted RBP18.62■□□□□ 0.57
CHD1L-203ENST00000369259 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
CHD1L-203ENST00000369259 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 MYO1BO43795 1136 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CPP00450 1065 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 COL15A1P39059 1388 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 ISM2Q6H9L7 571 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 ZSWIM4Q9H7M6 989 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CLIC4Q9Y696 253 aa18.62■□□□□ 0.57
CHD1L-203ENST00000369259 CUTAO60888 179 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 YEATS4O95619 227 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 HMGB1P09429 215 aaKnown RBP18.61■□□□□ 0.57
CHD1L-203ENST00000369259 CCT2P78371 535 aaKnown RBP18.61■□□□□ 0.57
CHD1L-203ENST00000369259 MSANTD4Q8NCY6 345 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 HDAC5Q9UQL6 1122 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 FLT4P35916 1363 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 SPTLC2O15270 562 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 PSEN1P49768 467 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
CHD1L-203ENST00000369259 FAM71BQ8TC56 605 aa18.61■□□□□ 0.57
CHD1L-203ENST00000369259 TBX2Q13207 712 aaPredicted RBP18.6■□□□□ 0.57
CHD1L-203ENST00000369259 EFCAB13Q8IY85 973 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 CEP112Q8N8E3 955 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 ABCB6Q9NP58 842 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 POLR3EQ9NVU0 708 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 SBNO1A3KN83 1393 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 ACEP12821 1306 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 RAPGEF3O95398 923 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 PTPN21Q16825 1174 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 HSP90B2PQ58FF3 399 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 TUBE1Q9UJT0 475 aa18.6■□□□□ 0.57
CHD1L-203ENST00000369259 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 TUBB4BP68371 445 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 SWT1Q5T5J6 900 aaKnown RBP18.59■□□□□ 0.57
CHD1L-203ENST00000369259 PNKPQ96T60 521 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 NCOA5Q9HCD5 579 aaKnown RBP18.59■□□□□ 0.57
CHD1L-203ENST00000369259 PFKFB1P16118 471 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
CHD1L-203ENST00000369259 MMS22LQ6ZRQ5 1243 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 PDILTQ8N807 584 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 CNNM3Q8NE01 707 aa18.59■□□□□ 0.57
CHD1L-203ENST00000369259 CARMIL3Q8ND23 1372 aa18.58■□□□□ 0.57
CHD1L-203ENST00000369259 PPFIA3O75145 1194 aa18.58■□□□□ 0.56
CHD1L-203ENST00000369259 PPFIA4O75335 1185 aa18.58■□□□□ 0.56
CHD1L-203ENST00000369259 CMA1P23946 247 aa18.58■□□□□ 0.56
CHD1L-203ENST00000369259 KARSQ15046 597 aaKnown RBP18.58■□□□□ 0.56
CHD1L-203ENST00000369259 CCDC102AQ96A19 550 aa18.58■□□□□ 0.56
CHD1L-203ENST00000369259 EDC3Q96F86 508 aaKnown RBP18.58■□□□□ 0.56
CHD1L-203ENST00000369259 INTS13Q9NVM9 706 aa18.58■□□□□ 0.56
CHD1L-203ENST00000369259 PUF60Q9UHX1 559 aaKnown RBP18.58■□□□□ 0.56
CHD1L-203ENST00000369259 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms