RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ATP11AP98196 1134 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 PPP4R3AQ6IN85 833 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GBP5Q96PP8 586 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 UPF3BQ9BZI7 483 aaKnown RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ACTR5Q9H9F9 607 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 PSMA8Q8TAA3 256 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 FBF1Q8TES7 1133 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 STMN1P16949 149 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 DMPKQ09013 629 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 CENPKQ9BS16 269 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GDPD2Q9HCC8 539 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ORC2Q13416 577 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 EP400NLQ6ZTU2 488 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 CTNNBL1Q8WYA6 563 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SRGAP3O43295 1099 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 H7C0S8 307 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SHQ1Q6PI26 577 aaKnown RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 HAUS2Q9NVX0 235 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 LIN7AO14910 233 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TDO2P48775 406 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ZBTB16Q05516 673 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 PPFIBP1Q86W92 1011 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ANAPC4Q9UJX5 808 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ITM2BQ9Y287 266 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 MAP3K15Q6ZN16 1313 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GOLGA8IPA6NC78 632 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TCERG1LQ5VWI1 586 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 GALNT17Q6IS24 598 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 EMBQ6PCB8 327 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 NUP62CLQ9H1M0 184 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SEMA3EO15041 775 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 HNRNPRO43390 633 aaKnown RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 RHOXF2BP0C7M4 288 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 SPDYCQ5MJ68 293 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TTC19Q6DKK2 380 aaPredicted RBP4.25□□□□□ -1.73
SYNE1-207ENST00000367255 CYTH2Q99418 400 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 RHOXF2Q9BQY4 288 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TRIM7Q9C029 511 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 C4BPBP20851 252 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 MAIP1Q8WWC4 291 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 ERLEC1Q96DZ1 483 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 TM6SF1Q9BZW5 370 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 C8orf4Q9NR00 106 aa4.25□□□□□ -1.73
SYNE1-207ENST00000367255 WDR97A6NE52 1622 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 SGSM2O43147 1006 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 GLRX3O76003 335 aaKnown RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ARHGAP6O43182 974 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 RBM42Q9BTD8 480 aaKnown RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 FGFR1OP2Q9NVK5 253 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 BIRC3Q13489 604 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ICA1Q05084 483 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 TBCCQ15814 346 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ADRM1Q16186 407 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 C10orf76Q5T2E6 689 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CTAGE15A4D2H0 777 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CTAGE8P0CG41 777 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CTAGE6Q86UF2 777 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CTAGE4Q8IX94 777 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ARL10Q8N8L6 244 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 JPH2Q9BR39 696 aaPredicted RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 DDX21Q9NR30 783 aaKnown RBP eCLIP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CFTRP13569 1480 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 MROH2BQ7Z745 1585 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ARAP1Q96P48 1450 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 KRT86O43790 486 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 SPA17Q15506 151 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 RNF41Q9H4P4 317 aaPredicted RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 TOMM22Q9NS69 142 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 TNIP1Q15025 636 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 RBM33Q96EV2 1170 aaKnown RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 SLC8A3P57103 927 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 BZW2Q9Y6E2 419 aaKnown RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 SYCE1Q8N0S2 351 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CYP46A1Q9Y6A2 500 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 UBN2Q6ZU65 1347 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 TMEM232C9JQI7 657 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 FBXO41Q8TF61 875 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 RABGGTAQ92696 567 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 SPTLC3Q9NUV7 552 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 NUTM2AQ8IVF1 878 aaPredicted RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 CATSPER1Q8NEC5 780 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ARHGEF10O15013 1369 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 NAA20P61599 178 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ATAD3BQ5T9A4 648 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ALS2CLQ60I27 953 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 KIF5AQ12840 1032 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 PTPRGP23470 1445 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 TTC21AQ8NDW8 1320 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 RAD21O60216 631 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 ATN1P54259 1190 aaPredicted RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 SMC6Q96SB8 1091 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 GNA14O95837 355 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 HAUS8Q9BT25 410 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 FOXP3Q9BZS1 431 aa4.24□□□□□ -1.73
SYNE1-207ENST00000367255 MVPQ14764 893 aaKnown RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 APBB1IPQ7Z5R6 666 aaPredicted RBP4.24□□□□□ -1.73
SYNE1-207ENST00000367255 LRRFIP2Q9Y608 721 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms