RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 TMEM102Q8N9M5 508 aaPredicted RBP9.59□□□□□ -0.87
RNU4-40P-201ENST00000364351 POLIQ9UNA4 740 aa9.59□□□□□ -0.87
RNU4-40P-201ENST00000364351 SOX1O00570 391 aaPredicted RBP9.58□□□□□ -0.88
RNU4-40P-201ENST00000364351 ADAMTS4O75173 837 aa9.58□□□□□ -0.88
RNU4-40P-201ENST00000364351 SPINK2P20155 84 aa9.58□□□□□ -0.88
RNU4-40P-201ENST00000364351 MTMR3Q13615 1198 aa9.58□□□□□ -0.88
RNU4-40P-201ENST00000364351 NXPE3Q969Y0 559 aa9.58□□□□□ -0.88
RNU4-40P-201ENST00000364351 GOLGA2P5Q9HBQ8 144 aa9.58□□□□□ -0.88
RNU4-40P-201ENST00000364351 ARID3CA6NKF2 412 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 WDR64B1ANS9 1081 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 EREGO14944 169 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 IKBKEQ14164 716 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 ALKBH2Q6NS38 261 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 BSNDQ8WZ55 320 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 ZKSCAN3Q9BRR0 538 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 HIF3AQ9Y2N7 669 aa9.57□□□□□ -0.88
RNU4-40P-201ENST00000364351 MEGF11A6BM72 1044 aa9.56□□□□□ -0.88
RNU4-40P-201ENST00000364351 PHACTR2O75167 634 aa9.56□□□□□ -0.88
RNU4-40P-201ENST00000364351 TAL1P17542 331 aaPredicted RBP9.56□□□□□ -0.88
RNU4-40P-201ENST00000364351 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
RNU4-40P-201ENST00000364351 C12orf50Q8NA57 414 aaPredicted RBP9.56□□□□□ -0.88
RNU4-40P-201ENST00000364351 MFSD14AQ96MC6 490 aa9.56□□□□□ -0.88
RNU4-40P-201ENST00000364351 TNFRSF21O75509 655 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 RXRBP28702 533 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 SGO2Q562F6 1265 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 VN1R5Q7Z5H4 357 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 DTX1Q86Y01 620 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 KRTAP19-1Q8IUB9 90 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 ASAP3Q8TDY4 903 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 USP26Q9BXU7 913 aa9.55□□□□□ -0.88
RNU4-40P-201ENST00000364351 WNT11O96014 354 aa9.54□□□□□ -0.88
RNU4-40P-201ENST00000364351 EDN3P14138 238 aa9.54□□□□□ -0.88
RNU4-40P-201ENST00000364351 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
RNU4-40P-201ENST00000364351 SSFA2P28290 1259 aa9.53□□□□□ -0.88
RNU4-40P-201ENST00000364351 TXKP42681 527 aa9.52□□□□□ -0.89
RNU4-40P-201ENST00000364351 FBXL6Q8N531 539 aa9.52□□□□□ -0.89
RNU4-40P-201ENST00000364351 SNX29Q8TEQ0 813 aa9.52□□□□□ -0.89
RNU4-40P-201ENST00000364351 TMPRSS13Q9BYE2 586 aa9.52□□□□□ -0.89
RNU4-40P-201ENST00000364351 CYP4F12Q9HCS2 524 aa9.52□□□□□ -0.89
RNU4-40P-201ENST00000364351 ATG3Q9NT62 314 aa9.52□□□□□ -0.89
RNU4-40P-201ENST00000364351 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
RNU4-40P-201ENST00000364351 SMG8Q8ND04 991 aaKnown RBP9.51□□□□□ -0.89
RNU4-40P-201ENST00000364351 GIMAP7Q8NHV1 300 aa9.51□□□□□ -0.89
RNU4-40P-201ENST00000364351 LATS2Q9NRM7 1088 aa9.51□□□□□ -0.89
RNU4-40P-201ENST00000364351 LOC100289279A0A1B0GTE1 492 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 FAM13AO94988 1023 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 DLGAP3O95886 979 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 EHHADHQ08426 723 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 NFKBIBQ15653 356 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
RNU4-40P-201ENST00000364351 ESRRAP11474 423 aaPredicted RBP9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 DRD2P14416 443 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 USP5P45974 858 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 USP11P51784 963 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 GSTM4Q03013 218 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 EXOSC6Q5RKV6 272 aaKnown RBP9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 FMNL2Q96PY5 1086 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 BHLHE41Q9C0J9 482 aaPredicted RBP9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 SUGCTQ9HAC7 445 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 AMOTL2Q9Y2J4 779 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
RNU4-40P-201ENST00000364351 FAM95CA0A1B0GW59 222 aa9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 TIAF1O95411 115 aa9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 F13BP05160 661 aa9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 NPR3P17342 541 aa9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 PEAR1Q5VY43 1037 aaPredicted RBP9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 OSBPL1AQ9BXW6 950 aa9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 SOX17Q9H6I2 414 aaPredicted RBP9.48□□□□□ -0.89
RNU4-40P-201ENST00000364351 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 FZD6O60353 706 aa9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 POLR3DP05423 398 aaPredicted RBP9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 FBLIM1Q8WUP2 373 aa9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 MTMR7Q9Y216 660 aa9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 RNF114Q9Y508 228 aa9.47□□□□□ -0.89
RNU4-40P-201ENST00000364351 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 ABL1P00519 1130 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 CDPF1Q6NVV7 123 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 PAOXQ6QHF9 649 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 SHISA5Q8N114 240 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 ANO2Q9NQ90 1003 aa9.46□□□□□ -0.9
RNU4-40P-201ENST00000364351 FKBP4Q02790 459 aaKnown RBP eCLIP9.45□□□□□ -0.9
RNU4-40P-201ENST00000364351 SF3B2Q13435 895 aaKnown RBP9.44□□□□□ -0.9
RNU4-40P-201ENST00000364351 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
RNU4-40P-201ENST00000364351 ANGEL1Q9UNK9 670 aaKnown RBP9.44□□□□□ -0.9
RNU4-40P-201ENST00000364351 CARNS1A5YM72 827 aa9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 FOSL1P15407 271 aa9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 C2CD4AQ8NCU7 369 aaPredicted RBP9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 KRTAP9-9Q9BYP9 154 aa9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 KRTAP9-4Q9BYQ2 154 aa9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 ADGRE2Q9UHX3 823 aa9.43□□□□□ -0.9
RNU4-40P-201ENST00000364351 A0A096LPE4 126 aa9.42□□□□□ -0.9
RNU4-40P-201ENST00000364351 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
RNU4-40P-201ENST00000364351 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
RNU4-40P-201ENST00000364351 ZNF211Q13398 564 aaPredicted RBP9.42□□□□□ -0.9
RNU4-40P-201ENST00000364351 GJD3Q8N144 294 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms