RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 CPNE3O75131 537 aaKnown RBP3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 KIAA1211Q6ZU35 1233 aa3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 SLC51AQ86UW1 340 aa3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 FOXD4L4Q8WXT5 416 aaPredicted RBP3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 LACRTQ9GZZ8 138 aa3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 AKTIPQ9H8T0 292 aa3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 SEC31BQ9NQW1 1179 aa3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 SH2B1Q9NRF2 756 aaPredicted RBP3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 LATS2Q9NRM7 1088 aa3.47□□□□□ -1.85
RNU4-13P-201ENST00000364019 WISP1O95388 367 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 ESRRAP11474 423 aaPredicted RBP3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 IREB2P48200 963 aaKnown RBP3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 CABP4P57796 275 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 ORC1Q13415 861 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 AAMPQ13685 434 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 UVSSAQ2YD98 709 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 USPL1Q5W0Q7 1092 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 FAM117BQ6P1L5 589 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 TMC7Q7Z402 723 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 GLIS3Q8NEA6 775 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 KLHDC7BQ96G42 594 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 FAM46AQ96IP4 442 aaKnown RBP3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 CSRNP1Q96S65 589 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 USP21Q9UK80 565 aa3.46□□□□□ -1.86
RNU4-13P-201ENST00000364019 SOX1O00570 391 aaPredicted RBP3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 EIF1AYO14602 144 aaKnown RBP3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 TRPA1O75762 1119 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 GRIA4P48058 902 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 FMR1Q06787 632 aaKnown RBP eCLIP3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 C19orf57Q0VDD7 668 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 ENOX2Q16206 610 aaKnown RBP3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 RPS26P11Q5JNZ5 115 aaPredicted RBP3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 ANKRD24Q8TF21 1146 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 CCDC74AQ96AQ1 378 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 ASB16Q96NS5 453 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 UBL7Q96S82 380 aaPredicted RBP3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 TMPRSS13Q9BYE2 586 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 SUGCTQ9HAC7 445 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 ABCB6Q9NP58 842 aa3.45□□□□□ -1.86
RNU4-13P-201ENST00000364019 SYNGAP1Q96PV0 1343 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 A0A096LPE4 126 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 A0A1W2PPZ6 126 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 TIAF1O95411 115 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 B3GALT4O96024 378 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 IKBKEQ14164 716 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 COL19A1Q14993 1142 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 HGSNATQ68CP4 663 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 TXNDC11Q6PKC3 985 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 PRR23CQ6ZRP0 262 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 ARMC10Q8N2F6 343 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 TP53INP1Q96A56 240 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 NIF3L1Q9GZT8 377 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 CLEC4MQ9H2X3 399 aaPredicted RBP3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 SEMA6BQ9H3T3 888 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 ZNF576Q9H609 170 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 LIN7BQ9HAP6 207 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 IVNS1ABPQ9Y6Y0 642 aa3.44□□□□□ -1.86
RNU4-13P-201ENST00000364019 LOC100289279A0A1B0GTE1 492 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 METTL12A8MUP2 240 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 DDX3YO15523 660 aaKnown RBP3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 ALX3O95076 343 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 POLR3DP05423 398 aaPredicted RBP3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 ARL4DP49703 201 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 PCDH1Q08174 1060 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 ZNF423Q2M1K9 1284 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 PRSS36Q5K4E3 855 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 ANKRD34AQ69YU3 496 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 SMG8Q8ND04 991 aaKnown RBP3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 FBF1Q8TES7 1133 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 UBASH3BQ8TF42 649 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 CARD10Q9BWT7 1032 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 CEP41Q9BYV8 373 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 RNF208Q9H0X6 261 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 NPHS2Q9NP85 383 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 TRAK1Q9UPV9 953 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 HIF3AQ9Y2N7 669 aa3.43□□□□□ -1.86
RNU4-13P-201ENST00000364019 TMEM238LA0A1B0GVL6 79 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 FAM177BA6PVY3 158 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 DLGAP3O95886 979 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 XRCC5P13010 732 aaKnown RBP3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 GRM2Q14416 872 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 DUOXA2Q1HG44 320 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 SPRED3Q2MJR0 410 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 ACAD11Q709F0 780 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 AGGF1Q8N302 714 aaeCLIP3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 MYRFLQ96LU7 910 aa3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 TRIM56Q9BRZ2 755 aaKnown RBP3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 GSX1Q9H4S2 264 aaPredicted RBP3.42□□□□□ -1.86
RNU4-13P-201ENST00000364019 MAPK1P28482 360 aa3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 PLCB3Q01970 1234 aa3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 SND1Q7KZF4 910 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 ZSCAN29Q8IWY8 852 aaPredicted RBP3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 C3orf58Q8NDZ4 430 aa3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 EPS8L3Q8TE67 593 aaKnown RBP3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 RUSC1Q9BVN2 902 aa3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 SRCIN1Q9C0H9 1055 aa3.41□□□□□ -1.86
RNU4-13P-201ENST00000364019 EHD4Q9H223 541 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms