RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 R3HDMLQ9H3Y0 253 aa11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 UNCXA6NJT0 531 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 FKTNO75072 461 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 ITGA6P23229 1130 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 KLRK1P26718 216 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 INHBEP58166 350 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 GCKRQ14397 625 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 MAP3K11Q16584 847 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 CCDC27Q2M243 656 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 SPRYD7Q5W111 196 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
COL4A3BP-202ENST00000357457 C15orf52Q6ZUT6 534 aaKnown RBP11□□□□□ -0.65
COL4A3BP-202ENST00000357457 G2E3Q7L622 706 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 IRS2Q9Y4H2 1338 aa11□□□□□ -0.65
COL4A3BP-202ENST00000357457 SASH1O94885 1247 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 ALDH1A1P00352 501 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 GTF2IP78347 998 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 KIAA0825Q8IV33 1275 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 STK31Q9BXU1 1019 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 CD209Q9NNX6 404 aa10.99□□□□□ -0.65
COL4A3BP-202ENST00000357457 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 CHRNDQ07001 517 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 MKRN3Q13064 507 aaKnown RBP10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 TWISTNBQ3B726 338 aaPredicted RBP10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 TSR2Q969E8 191 aaKnown RBP10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 MPHOSPH8Q99549 860 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 COL1A1P02452 1464 aaPredicted RBP10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 LAMB1P07942 1786 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
COL4A3BP-202ENST00000357457 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 ZBTB48P10074 688 aaPredicted RBP10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 IL1R1P14778 569 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 FLIIQ13045 1269 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 PRKG1Q13976 671 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 DLGAP5Q15398 846 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 MIER1Q8N108 512 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 CERS5Q8N5B7 392 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 LINS1Q8NG48 757 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 PPP2R3BQ9Y5P8 575 aa10.97□□□□□ -0.65
COL4A3BP-202ENST00000357457 IL16Q14005 1332 aa10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 SNAP23O00161 211 aa10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 PPP1R12BO60237 982 aaPredicted RBP10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 FOXO4P98177 505 aa10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 DNAAF4Q8WXU2 420 aa10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 PRMT6Q96LA8 375 aaPredicted RBP10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 MYH16Q9H6N6 1097 aa10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 FZD1Q9UP38 647 aa10.96□□□□□ -0.65
COL4A3BP-202ENST00000357457 ANKRD18BA2A2Z9 1011 aa10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 TAF5LO75529 589 aa10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 KCNJ4P48050 445 aa10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 SUPT20HL1Q3ZLR7 823 aa10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 INTS3Q68E01 1043 aaKnown RBP10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 WNK4Q96J92 1243 aa10.95□□□□□ -0.66
COL4A3BP-202ENST00000357457 SSC5DA1L4H1 1573 aa10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 IGF2BP3O00425 579 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 VAMP4O75379 141 aa10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 IFIT5Q13325 482 aaKnown RBP10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 CFAP100Q494V2 611 aa10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 NBPF12Q5TAG4 269 aaPredicted RBP10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 CLMNQ96JQ2 1002 aa10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
COL4A3BP-202ENST00000357457 A0A1B0GUL6 1792 aa10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 MYO1BO43795 1136 aa10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 GJA5P36382 358 aa10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 ZNF804AQ7Z570 1209 aa10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 TRIM17Q9Y577 477 aa10.93□□□□□ -0.66
COL4A3BP-202ENST00000357457 AOX1Q06278 1338 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 FAM205AQ6ZU69 1335 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 IREB2P48200 963 aaKnown RBP10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 RASA3Q14644 834 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 CCDC184Q52MB2 194 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 PTPN18Q99952 460 aa10.92□□□□□ -0.66
COL4A3BP-202ENST00000357457 RBBP6Q7Z6E9 1792 aaKnown RBP10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 CRHR2Q13324 411 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 EPHA10Q5JZY3 1008 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 LMBR1LQ6UX01 489 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 ANKRD13AQ8IZ07 590 aa10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
COL4A3BP-202ENST00000357457 ARMC5Q96C12 935 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms