RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PHACTR2O75167 634 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 RTN2O75298 545 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 RDXP35241 583 aaKnown RBP18.11■□□□□ 0.49
RTN3-205ENST00000356000 ADCY2Q08462 1091 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 ZC3H12AQ5D1E8 599 aaKnown RBP18.11■□□□□ 0.49
RTN3-205ENST00000356000 WDR24Q96S15 920 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 ABCB6Q9NP58 842 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 ADCY9O60503 1353 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 NRXN1Q9ULB1 1477 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 PDCP20941 246 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 CASP8Q14790 479 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 LRP6O75581 1613 aa18.11■□□□□ 0.49
RTN3-205ENST00000356000 SHOX2O60902 331 aaPredicted RBP18.1■□□□□ 0.49
RTN3-205ENST00000356000 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
RTN3-205ENST00000356000 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 WLSQ5T9L3 541 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 ISM2Q6H9L7 571 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 KIFC2Q96AC6 838 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 LRRC59Q96AG4 307 aaKnown RBP18.1■□□□□ 0.49
RTN3-205ENST00000356000 FAM210AQ96ND0 272 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
RTN3-205ENST00000356000 EVC2Q86UK5 1308 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 COL22A1Q8NFW1 1626 aaPredicted RBP18.1■□□□□ 0.49
RTN3-205ENST00000356000 KRT24Q2M2I5 525 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 SUGCTQ9HAC7 445 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 IFNKQ9P0W0 207 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 ODF2LQ9ULJ1 636 aa18.1■□□□□ 0.49
RTN3-205ENST00000356000 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
RTN3-205ENST00000356000 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 NAT10Q9H0A0 1025 aaKnown RBP18.09■□□□□ 0.49
RTN3-205ENST00000356000 ETAA1Q9NY74 926 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 STAP2Q9UGK3 403 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 CCT5P48643 541 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 FNTAP49354 379 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 GNG11P61952 73 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 ZNF483Q8TF39 744 aaPredicted RBP18.09■□□□□ 0.49
RTN3-205ENST00000356000 PNKPQ96T60 521 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
RTN3-205ENST00000356000 RNF40O75150 1001 aa18.08■□□□□ 0.49
RTN3-205ENST00000356000 PRPF6O94906 941 aaKnown RBP18.08■□□□□ 0.49
RTN3-205ENST00000356000 CHMP4BP1P59074 171 aa18.08■□□□□ 0.49
RTN3-205ENST00000356000 SRGAP1Q7Z6B7 1085 aa18.08■□□□□ 0.49
RTN3-205ENST00000356000 AMOTL1Q8IY63 956 aa18.08■□□□□ 0.49
RTN3-205ENST00000356000 DHX58Q96C10 678 aa18.08■□□□□ 0.49
RTN3-205ENST00000356000 GOLGA6L9A6NEM1 432 aa18.08■□□□□ 0.48
RTN3-205ENST00000356000 WWC2Q6AWC2 1192 aa18.08■□□□□ 0.48
RTN3-205ENST00000356000 BRINP3Q76B58 766 aa18.08■□□□□ 0.48
RTN3-205ENST00000356000 OTUD6BQ8N6M0 293 aa18.08■□□□□ 0.48
RTN3-205ENST00000356000 CD248Q9HCU0 757 aa18.08■□□□□ 0.48
RTN3-205ENST00000356000 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.48
RTN3-205ENST00000356000 CPA1P15085 419 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 LSG1Q9H089 658 aaKnown RBP18.07■□□□□ 0.48
RTN3-205ENST00000356000 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 CLSTN1O94985 981 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 AARSP49588 968 aaKnown RBP eCLIP18.07■□□□□ 0.48
RTN3-205ENST00000356000 CCNHP51946 323 aaPredicted RBP18.07■□□□□ 0.48
RTN3-205ENST00000356000 ME3Q16798 604 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 AP1ARQ63HQ0 302 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 FAM177A1Q8N128 213 aaPredicted RBP18.07■□□□□ 0.48
RTN3-205ENST00000356000 MEIS3Q99687 375 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 PPP2R2CQ9Y2T4 447 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 CAPN7Q9Y6W3 813 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 PPLO60437 1756 aa18.07■□□□□ 0.48
RTN3-205ENST00000356000 ATXN2Q99700 1313 aaKnown RBP18.06■□□□□ 0.48
RTN3-205ENST00000356000 TUBB4BP68371 445 aa18.06■□□□□ 0.48
RTN3-205ENST00000356000 SKIDA1Q1XH10 827 aa18.06■□□□□ 0.48
RTN3-205ENST00000356000 GBP3Q9H0R5 595 aa18.06■□□□□ 0.48
RTN3-205ENST00000356000 A0A087WWV3 80 aa18.06■□□□□ 0.48
RTN3-205ENST00000356000 IQCA1Q86XH1 822 aa18.06■□□□□ 0.48
RTN3-205ENST00000356000 SH3GL3Q99963 347 aa18.06■□□□□ 0.48
RTN3-205ENST00000356000 ZBTB12Q9Y330 459 aaPredicted RBP18.06■□□□□ 0.48
RTN3-205ENST00000356000 CUTAO60888 179 aa18.05■□□□□ 0.48
RTN3-205ENST00000356000 FSBPO95073 299 aa18.05■□□□□ 0.48
RTN3-205ENST00000356000 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
RTN3-205ENST00000356000 C8orf58Q8NAV2 365 aa18.05■□□□□ 0.48
RTN3-205ENST00000356000 KCNB2Q92953 911 aa18.05■□□□□ 0.48
RTN3-205ENST00000356000 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
RTN3-205ENST00000356000 BPIFA3Q9BQP9 254 aa18.05■□□□□ 0.48
RTN3-205ENST00000356000 VIPAS39Q9H9C1 493 aa18.05■□□□□ 0.48
RTN3-205ENST00000356000 LRRIQ3A6PVS8 624 aaPredicted RBP18.04■□□□□ 0.48
RTN3-205ENST00000356000 ICA1Q05084 483 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.04■□□□□ 0.48
RTN3-205ENST00000356000 NECAB1Q8N987 351 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 ARMC2Q8NEN0 867 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 CDHR2Q9BYE9 1310 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 MYO1FO00160 1098 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 FCHSD2O94868 740 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 CEP112Q8N8E3 955 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 CCDC26Q8TAB7 109 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 LRRCC1Q9C099 1032 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 AOX1Q06278 1338 aa18.04■□□□□ 0.48
RTN3-205ENST00000356000 BAG1Q99933 345 aaPredicted RBP18.03■□□□□ 0.48
RTN3-205ENST00000356000 ARHGAP6O43182 974 aa18.03■□□□□ 0.48
RTN3-205ENST00000356000 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
RTN3-205ENST00000356000 IPO7O95373 1038 aaKnown RBP18.03■□□□□ 0.48
RTN3-205ENST00000356000 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
RTN3-205ENST00000356000 TM6SF1Q9BZW5 370 aa18.03■□□□□ 0.48
RTN3-205ENST00000356000 ZSWIM4Q9H7M6 989 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms