RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MYH8P13535 1937 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 hCG_1642624A0A1W2PR95 340 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 GYS2P54840 703 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 CHMLP26374 656 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 CEBPZQ03701 1054 aaKnown RBP6.93□□□□□ -1.3
CD47-201ENST00000355354 BMP2KLQ5H9B9 411 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 TTC22Q5TAA0 569 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 TTC14Q96N46 770 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 FAM205CA6NFA0 338 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 RPS6KA4O75676 772 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 STK3Q13188 491 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 FAM13BQ9NYF5 915 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 EIF5P55010 431 aaKnown RBP6.93□□□□□ -1.3
CD47-201ENST00000355354 TTLL7Q6ZT98 887 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 LRRC15Q8TF66 581 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 ARHGEF1Q92888 912 aaKnown RBP6.93□□□□□ -1.3
CD47-201ENST00000355354 NBPF3Q9H094 633 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 SYT1P21579 422 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 EARS2Q5JPH6 523 aaKnown RBP6.93□□□□□ -1.3
CD47-201ENST00000355354 DNAAF5Q86Y56 855 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 ANKRD44Q8N8A2 993 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 SUGCTQ9HAC7 445 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 SNRKQ9NRH2 765 aa6.93□□□□□ -1.3
CD47-201ENST00000355354 NFKBIEO00221 500 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 AK2P54819 239 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 WDR63Q8IWG1 891 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 RILPL2Q969X0 211 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 CFAP44Q96MT7 982 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 ZNF236Q9UL36 1845 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 IRS2Q9Y4H2 1338 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 USP48Q86UV5 1035 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 R3HCC1Q9Y3T6 440 aaKnown RBP6.92□□□□□ -1.3
CD47-201ENST00000355354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.92□□□□□ -1.3
CD47-201ENST00000355354 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 ZNF446Q9NWS9 450 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 NPHP1O15259 732 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 CLCN1P35523 988 aa6.92□□□□□ -1.3
CD47-201ENST00000355354 HDGFL2Q7Z4V5 671 aaPredicted RBP6.92□□□□□ -1.3
CD47-201ENST00000355354 ZNF496Q96IT1 587 aaPredicted RBP6.92□□□□□ -1.3
CD47-201ENST00000355354 CCNL1Q9UK58 526 aaPredicted RBP6.92□□□□□ -1.3
CD47-201ENST00000355354 A0A0G2JMZ2 1700 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 TTC28Q96AY4 2481 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 VGLL3A8MV65 326 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 NR1I2O75469 434 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 FLIIQ13045 1269 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 CRY2Q49AN0 593 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 ZNF384Q8TF68 577 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 COG3Q96JB2 828 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 U2AF2P26368 475 aaKnown RBP eCLIP6.91□□□□□ -1.35e-11■■■■■ 31.2
CD47-201ENST00000355354 LRRC24Q50LG9 513 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 SLC30A10Q6XR72 485 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 SPC24Q8NBT2 197 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 FLAD1Q8NFF5 587 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
CD47-201ENST00000355354 KIF16BQ96L93 1317 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 MRPS25P82663 173 aaKnown RBP6.91□□□□□ -1.3
CD47-201ENST00000355354 FIBPO43427 364 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 SPECC1Q5M775 1068 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 INTS3Q68E01 1043 aaKnown RBP6.91□□□□□ -1.3
CD47-201ENST00000355354 SUCLG2Q96I99 432 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 DBNLQ9UJU6 430 aaKnown RBP6.91□□□□□ -1.3
CD47-201ENST00000355354 MAST2Q6P0Q8 1798 aa6.91□□□□□ -1.3
CD47-201ENST00000355354 ATP1A3P13637 1013 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 HSPA6P17066 643 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 SHROOM1Q2M3G4 852 aaPredicted RBP6.9□□□□□ -1.3
CD47-201ENST00000355354 L3MBTL3Q96JM7 780 aaPredicted RBP6.9□□□□□ -1.3
CD47-201ENST00000355354 UIMC1Q96RL1 719 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 NCOR1O75376 2440 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 BAZ2AQ9UIF9 1905 aaKnown RBP6.9□□□□□ -1.3
CD47-201ENST00000355354 TOB2Q14106 344 aaPredicted RBP6.9□□□□□ -1.3
CD47-201ENST00000355354 DPF2Q92785 391 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 BOLA2Q9H3K6 86 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 SNX14Q9Y5W7 946 aa6.9□□□□□ -1.3
CD47-201ENST00000355354 MYL6BP14649 208 aa6.9□□□□□ -1.31
CD47-201ENST00000355354 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.31
CD47-201ENST00000355354 SLC52A2Q9HAB3 445 aa6.9□□□□□ -1.31
CD47-201ENST00000355354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.9□□□□□ -1.31
CD47-201ENST00000355354 FDPSP14324 419 aaKnown RBP6.9□□□□□ -1.31
CD47-201ENST00000355354 DDX49Q9Y6V7 483 aaKnown RBP6.9□□□□□ -1.31
CD47-201ENST00000355354 SLC4A8Q2Y0W8 1093 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 C3orf67Q6ZVT6 689 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 MYL10Q9BUA6 226 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 GOLPH3LQ9H4A5 285 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 PCDH10Q9P2E7 1040 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 NUP214P35658 2090 aaPredicted RBP6.89□□□□□ -1.31
CD47-201ENST00000355354 CACTINQ8WUQ7 758 aaKnown RBP6.89□□□□□ -1.31
CD47-201ENST00000355354 ZFP91Q96JP5 570 aaPredicted RBP6.89□□□□□ -1.31
CD47-201ENST00000355354 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 RLFQ13129 1914 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 CAMTA2O94983 1202 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 BRD1O95696 1058 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 NCLP19338 710 aaKnown RBP6.89□□□□□ -1.31
CD47-201ENST00000355354 ADORA1P30542 326 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
CD47-201ENST00000355354 LSG1Q9H089 658 aaKnown RBP6.89□□□□□ -1.31
CD47-201ENST00000355354 POLD1P28340 1107 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 CCDC83Q8IWF9 413 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 MYH6P13533 1939 aa6.89□□□□□ -1.31
CD47-201ENST00000355354 CYP21A2P08686 494 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 DDX46Q7L014 1031 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms