RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 TGFB2P61812 414 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 TSNAXIP1Q2TAA8 658 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 GPATCH4Q5T3I0 446 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 STRBPQ96SI9 672 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 PSMD1Q99460 953 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 BOLA1Q9Y3E2 137 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 NUTM2FA1L443 756 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 PRMT2P55345 433 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 RIPPLY3P57055 190 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 NFX1Q12986 1120 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 TRIM61Q5EBN2 209 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 SPNS2Q8IVW8 549 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 TTC8Q8TAM2 541 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 FRMD6Q96NE9 622 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 RPS6KC1Q96S38 1066 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 POP1Q99575 1024 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 PRR36Q9H6K5 1346 aa2.79□□□□□ -1.96
SMARCAD1-201ENST00000354268 ZCCHC6Q5VYS8 1495 aaKnown RBP2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 ARNTLO00327 626 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MCM4P33991 863 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 FAM50AQ14320 339 aaKnown RBP2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 TMEM31Q5JXX7 168 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 BROXQ5VW32 411 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 FOXB2Q5VYV0 432 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 FAM196AQ6ZSG2 479 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MORC4Q8TE76 937 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 ERO1AQ96HE7 468 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MPHOSPH6Q99547 160 aaKnown RBP2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 SPOCK3Q9BQ16 436 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 SLC5A4Q9NY91 659 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 SMARCA4P51532 1647 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 TMEM8BA6NDV4 472 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MICAL2O94851 1124 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 DPP6P42658 865 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 SREBF2Q12772 1141 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 SCGB2A2Q13296 93 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 TOGARAM2Q6ZUX3 1019 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 RNF169Q8NCN4 708 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 KCNK17Q96T54 332 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 TRIM56Q9BRZ2 755 aaKnown RBP2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 TCP11L1Q9NUJ3 509 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 AXIN2Q9Y2T1 843 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 PCDHGB7Q9Y5F8 929 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 BPIP17213 487 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 PMLP29590 882 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MTMR2Q13614 643 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 CCDC127Q96BQ5 260 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MSRAQ9UJ68 235 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 CDV3Q9UKY7 258 aaKnown RBP2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 FANCIQ9NVI1 1328 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 MRC2Q9UBG0 1479 aa2.78□□□□□ -1.96
SMARCAD1-201ENST00000354268 FAM205CA6NFA0 338 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 BAIAP3O94812 1187 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 IGFBP4P22692 258 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 USP14P54578 494 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 FKBP4Q02790 459 aaKnown RBP eCLIP2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 PRKG1Q13976 671 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 ACAP1Q15027 740 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 WAPLQ7Z5K2 1190 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 JARID2Q92833 1246 aaPredicted RBP2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 ARPC5LQ9BPX5 153 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 USP47Q96K76 1375 aa2.78□□□□□ -1.97
SMARCAD1-201ENST00000354268 BPNT1O95861 308 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 KRT19P08727 400 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 GTF2A2P52657 109 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 ANAPC15P60006 121 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 IL31Q6EBC2 164 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 ADAMTS18Q8TE60 1221 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 SNRNP27Q8WVK2 155 aaKnown RBP2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 MDFIQ99750 246 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 TNKS2Q9H2K2 1166 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 GGNBP2Q9H3C7 697 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 SUSD2Q9UGT4 822 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAPK8IP1Q9UQF2 711 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 SYNJ1O43426 1573 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 TNKSO95271 1327 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 DDTLA6NHG4 134 aaPredicted RBP2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 PRR5-ARHGAP8B1AHC4 643 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 H3BRB1 525 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 GABRDO14764 452 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 SRGAP2CP0DJJ0 459 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 TRIM27P14373 513 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 ARHGAP8P85298 464 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 DGKZQ13574 1117 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 MLECQ14165 292 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 PEAR1Q5VY43 1037 aaPredicted RBP2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 IFNL3Q8IZI9 196 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 TUT1Q9H6E5 874 aaKnown RBP2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 FKBPLQ9UIM3 349 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 AP1G2O75843 785 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 GLRX3O76003 335 aaKnown RBP2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 TOMM70O94826 608 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAN2A2P49641 1150 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 WNT7BP56706 349 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 RRS1Q15050 365 aaKnown RBP2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 KLHL22Q53GT1 634 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 FBXL19Q6PCT2 694 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 CCDC26Q8TAB7 109 aa2.77□□□□□ -1.97
SMARCAD1-201ENST00000354268 SLC12A5Q9H2X9 1139 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms