RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 ANTXR2P58335 489 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 CARMIL3Q8ND23 1372 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 DENND2AQ9ULE3 1009 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 UBN2Q6ZU65 1347 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 MB21D2Q8IYB1 491 aaPredicted RBP25.15■■□□□ 1.62
CCDC38-201ENST00000344280 NKX2-3Q8TAU0 364 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 EVCP57679 992 aa25.14■■□□□ 1.62
CCDC38-201ENST00000344280 FBXL16Q8N461 479 aa25.14■■□□□ 1.62
CCDC38-201ENST00000344280 CBX8Q9HC52 389 aa25.14■■□□□ 1.62
CCDC38-201ENST00000344280 PRC1O43663 620 aa25.14■■□□□ 1.61
CCDC38-201ENST00000344280 OTUD7BQ6GQQ9 843 aa25.14■■□□□ 1.61
CCDC38-201ENST00000344280 SPC24Q8NBT2 197 aa25.14■■□□□ 1.61
CCDC38-201ENST00000344280 RCOR1Q9UKL0 485 aa25.14■■□□□ 1.61
CCDC38-201ENST00000344280 GOLPH3LQ9H4A5 285 aa25.13■■□□□ 1.61
CCDC38-201ENST00000344280 PIH1D3Q9NQM4 214 aaKnown RBP25.13■■□□□ 1.61
CCDC38-201ENST00000344280 MYH15Q9Y2K3 1946 aa25.13■■□□□ 1.61
CCDC38-201ENST00000344280 NBPF3Q9H094 633 aa25.12■■□□□ 1.61
CCDC38-201ENST00000344280 HPS5Q9UPZ3 1129 aa25.12■■□□□ 1.61
CCDC38-201ENST00000344280 SLC9C2Q5TAH2 1124 aa25.12■■□□□ 1.61
CCDC38-201ENST00000344280 DZIP3Q86Y13 1208 aaKnown RBP25.12■■□□□ 1.61
CCDC38-201ENST00000344280 HELBQ8NG08 1087 aaPredicted RBP25.12■■□□□ 1.61
CCDC38-201ENST00000344280 ABCC12Q96J65 1359 aa25.12■■□□□ 1.61
CCDC38-201ENST00000344280 MYH7P12883 1935 aa25.12■■□□□ 1.61
CCDC38-201ENST00000344280 MYO5AQ9Y4I1 1855 aaKnown RBP25.11■■□□□ 1.61
CCDC38-201ENST00000344280 PDE8BO95263 885 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 ADD2P35612 726 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 PHKA1P46020 1223 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 KIF3AQ9Y496 699 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 KLF18A0A0U1RQI7 1052 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 PIBF1Q8WXW3 757 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 KCNF1Q9H3M0 494 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 NUP98P52948 1817 aa25.11■■□□□ 1.61
CCDC38-201ENST00000344280 MYH3P11055 1940 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.1■■□□□ 1.61
CCDC38-201ENST00000344280 EXOC5O00471 708 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 ZNF213O14771 459 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 CCAR1Q8IX12 1150 aaKnown RBP25.1■■□□□ 1.61
CCDC38-201ENST00000344280 DNAJC25Q9H1X3 360 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 GJB4Q9NTQ9 266 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 SLIT2O94813 1529 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 SNAP23O00161 211 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 PDE8AO60658 829 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 IDH1O75874 414 aaKnown RBP25.1■■□□□ 1.61
CCDC38-201ENST00000344280 CCDC102BQ68D86 513 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 NCOA7Q8NI08 942 aa25.1■■□□□ 1.61
CCDC38-201ENST00000344280 ANKRD36CQ5JPF3 1778 aa25.09■■□□□ 1.61
CCDC38-201ENST00000344280 GOLGA8BA8MQT2 603 aa25.09■■□□□ 1.61
CCDC38-201ENST00000344280 TERF1P54274 439 aa25.09■■□□□ 1.61
CCDC38-201ENST00000344280 SNW1Q13573 536 aaKnown RBP25.09■■□□□ 1.61
CCDC38-201ENST00000344280 SASS6Q6UVJ0 657 aa25.09■■□□□ 1.61
CCDC38-201ENST00000344280 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.09■■□□□ 1.61
CCDC38-201ENST00000344280 NOLC1Q14978 699 aaKnown RBP eCLIP25.08■■□□□ 1.61
CCDC38-201ENST00000344280 WWC3Q9ULE0 1092 aa25.08■■□□□ 1.61
CCDC38-201ENST00000344280 RALYLQ86SE5 291 aaKnown RBP25.07■■□□□ 1.6
CCDC38-201ENST00000344280 TBC1D10CQ8IV04 446 aa25.07■■□□□ 1.6
CCDC38-201ENST00000344280 ZNF34Q8IZ26 560 aa25.07■■□□□ 1.6
CCDC38-201ENST00000344280 ZNF512BQ96KM6 892 aaPredicted RBP25.07■■□□□ 1.6
CCDC38-201ENST00000344280 ZNF532Q9HCE3 1301 aa25.07■■□□□ 1.6
CCDC38-201ENST00000344280 FAM177BA6PVY3 158 aa25.07■■□□□ 1.6
CCDC38-201ENST00000344280 IL6STP40189 918 aaPredicted RBP25.07■■□□□ 1.6
CCDC38-201ENST00000344280 ZNF165P49910 485 aa25.06■■□□□ 1.6
CCDC38-201ENST00000344280 ZNF396Q96N95 335 aaPredicted RBP25.06■■□□□ 1.6
CCDC38-201ENST00000344280 A0A087WWV3 80 aa25.06■■□□□ 1.6
CCDC38-201ENST00000344280 ERVV-1B6SEH8 477 aa25.06■■□□□ 1.6
CCDC38-201ENST00000344280 ME1P48163 572 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 PYCARDQ9ULZ3 195 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 UQCRHLA0A096LP55 91 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 POLR3DP05423 398 aaPredicted RBP25.05■■□□□ 1.6
CCDC38-201ENST00000344280 UQCRHP07919 91 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 PDE6AP16499 860 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 ARID4AP29374 1257 aaPredicted RBP25.05■■□□□ 1.6
CCDC38-201ENST00000344280 CYB5R4Q7L1T6 521 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 ENGASEQ8NFI3 743 aa25.05■■□□□ 1.6
CCDC38-201ENST00000344280 A0A0G2JS52 829 aa25.04■■□□□ 1.6
CCDC38-201ENST00000344280 APPP05067 770 aa25.04■■□□□ 1.6
CCDC38-201ENST00000344280 SUSD4Q5VX71 490 aa25.04■■□□□ 1.6
CCDC38-201ENST00000344280 C8orf76Q96K31 380 aa25.04■■□□□ 1.6
CCDC38-201ENST00000344280 ORC3Q9UBD5 711 aaPredicted RBP25.04■■□□□ 1.6
CCDC38-201ENST00000344280 DDX60Q8IY21 1712 aaKnown RBP25.04■■□□□ 1.6
CCDC38-201ENST00000344280 COL14A1Q05707 1796 aaKnown RBP25.04■■□□□ 1.6
CCDC38-201ENST00000344280 TCRBV5S4A2TA0A5A2 114 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 FGFR2P21802 821 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 TTF1Q15361 905 aaPredicted RBP25.03■■□□□ 1.6
CCDC38-201ENST00000344280 ZSCAN25Q6NSZ9 544 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 C11orf57Q6ZUT1 292 aaPredicted RBP25.03■■□□□ 1.6
CCDC38-201ENST00000344280 TDRD7Q8NHU6 1098 aaKnown RBP25.03■■□□□ 1.6
CCDC38-201ENST00000344280 ERCC4Q92889 916 aaPredicted RBP25.03■■□□□ 1.6
CCDC38-201ENST00000344280 SENP2Q9HC62 589 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 PCDHA7Q9UN72 937 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 ATRNO75882 1429 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 UBE3CQ15386 1083 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 PUM3Q15397 648 aaKnown RBP25.03■■□□□ 1.6
CCDC38-201ENST00000344280 ATL3Q6DD88 541 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 INCENPQ9NQS7 918 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 SEC31BQ9NQW1 1179 aa25.03■■□□□ 1.6
CCDC38-201ENST00000344280 RXRAP19793 462 aa25.02■■□□□ 1.6
CCDC38-201ENST00000344280 DNTTIP2Q5QJE6 756 aaKnown RBP25.02■■□□□ 1.6
CCDC38-201ENST00000344280 FBXO18Q8NFZ0 1043 aa25.02■■□□□ 1.6
CCDC38-201ENST00000344280 CLIC4Q9Y696 253 aa25.02■■□□□ 1.6
CCDC38-201ENST00000344280 INTS5Q6P9B9 1019 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms