RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 PI4KAP1Q8N8J0 262 aa6.09□□□□□ -1.43
PDE4B-201ENST00000329654 PPME1Q9Y570 386 aa6.09□□□□□ -1.43
PDE4B-201ENST00000329654 LAMB2P55268 1798 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CYP19A1P11511 503 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 NAP1L1P55209 391 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 PUS10Q3MIT2 529 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CEP85Q6P2H3 762 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 LINS1Q8NG48 757 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 PLBD2Q8NHP8 589 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 MEIS3Q99687 375 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 METTL22Q9BUU2 404 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SRCIN1Q9C0H9 1055 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 RBM27Q9P2N5 1060 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 ZNF652Q9Y2D9 606 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SCN7AQ01118 1682 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 RGL2O15211 777 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 ST18O60284 1047 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 MAGEA8P43361 318 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CHAF1AQ13111 956 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 DEF6Q9H4E7 631 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CIZ1Q9ULV3 898 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 ZNF232Q9UNY5 417 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 PES1O00541 588 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CCP110O43303 1012 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SMARCA5O60264 1052 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 MARCH6O60337 910 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 MTX1Q13505 466 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 MFSD4BQ5TF39 518 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CACTIN-AS1Q8N1I8 211 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 XAGE3Q8WTP9 111 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 LARP6Q9BRS8 491 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 DCTPP1Q9H773 170 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 MAP3K2Q9Y2U5 619 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CD2APQ9Y5K6 639 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 CD2BP2O95400 341 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 GNAI2P04899 355 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SETSIPP0DME0 302 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 RC3H1Q5TC82 1133 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 C16orf71Q8IYS4 520 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SNRNP27Q8WVK2 155 aaKnown RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 ZNF396Q96N95 335 aaPredicted RBP6.08□□□□□ -1.44
PDE4B-201ENST00000329654 IRAK4Q9NWZ3 460 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 ETAA1Q9NY74 926 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SUN2Q9UH99 717 aa6.08□□□□□ -1.44
PDE4B-201ENST00000329654 SYNRGQ9UMZ2 1314 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 SMAPO00193 183 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 PPFIA2O75334 1257 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 PRPF40AO75400 957 aaKnown RBP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 ANXA1P04083 346 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 IRX1P78414 480 aaPredicted RBP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 ANKRD13DQ6ZTN6 518 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 COPS6Q7L5N1 327 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 DZIP3Q86Y13 1208 aaKnown RBP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 GOLGA6L1Q8N7Z2 621 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 SNX21Q969T3 373 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 FHDC1Q9C0D6 1143 aaPredicted RBP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 MYH3P11055 1940 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 IGKV5-2P06315 115 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 U2AF2P26368 475 aaKnown RBP eCLIP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 ATP8B2P98198 1209 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 POLA2Q14181 598 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 RAB3GAP1Q15042 981 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 TSGA10IPQ3SY00 556 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 LONRF3Q496Y0 759 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 GAS2L3Q86XJ1 694 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 DNAJC10Q8IXB1 793 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 SYT17Q9BSW7 474 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 CHCHD3Q9NX63 227 aaKnown RBP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 RPS6KA4O75676 772 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 TRIM28Q13263 835 aaKnown RBP6.07□□□□□ -1.44
PDE4B-201ENST00000329654 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 TATDN2Q93075 761 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 TRERF1Q96PN7 1200 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 SUGT1Q9Y2Z0 365 aa6.07□□□□□ -1.44
PDE4B-201ENST00000329654 COL24A1Q17RW2 1714 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 TNS1Q9HBL0 1735 aaKnown RBP6.06□□□□□ -1.44
PDE4B-201ENST00000329654 NEURL1BA8MQ27 555 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 EIF3JO75822 258 aaKnown RBP6.06□□□□□ -1.44
PDE4B-201ENST00000329654 IL6STP40189 918 aaPredicted RBP6.06□□□□□ -1.44
PDE4B-201ENST00000329654 HNRNPH2P55795 449 aaKnown RBP6.06□□□□□ -1.44
PDE4B-201ENST00000329654 NUCB2P80303 420 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 RABEP1Q15276 862 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 TMCO4Q5TGY1 634 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 C4AP0C0L4 1744 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 C4BP0C0L5 1744 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 CASZ1Q86V15 1759 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 BAG4O95429 457 aaKnown RBP6.06□□□□□ -1.44
PDE4B-201ENST00000329654 A1BGP04217 495 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 CASP7P55210 303 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 TRIM74Q86UV6 250 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 TRIM73Q86UV7 250 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 RNF214Q8ND24 703 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 SSH3Q8TE77 659 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 ANKRD7Q92527 254 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 RILPL2Q969X0 211 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 RMI1Q9H9A7 625 aa6.06□□□□□ -1.44
PDE4B-201ENST00000329654 CWC25Q9NXE8 425 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms