RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 PDE4CQ08493 712 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 SSRP1Q08945 709 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 SOGA3Q5TF21 947 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 SLF2Q8IX21 1173 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 ESR2Q92731 530 aa10.85□□□□□ -0.67
TMEM39A-201ENST00000319172 ERVV-1B6SEH8 477 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 PRDM1O75626 825 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 SYT1P21579 422 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 DNM1Q05193 864 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 NCOA5Q9HCD5 579 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 DENND2AQ9ULE3 1009 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 PXDNQ92626 1479 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 LETM1O95202 739 aaPredicted RBP10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 CCDC192P0DO97 292 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 ZNF589Q86UQ0 364 aaPredicted RBP10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 KRT23Q9C075 422 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 TRIM5Q9C035 493 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 CPDO75976 1380 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 ADCK5Q3MIX3 580 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 SLFNL1Q499Z3 407 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 CKAP2LQ8IYA6 745 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 RBM17Q96I25 401 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 VAT1LQ9HCJ6 419 aa10.84□□□□□ -0.67
TMEM39A-201ENST00000319172 NCOA3Q9Y6Q9 1424 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 HSPA1LP34931 641 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 LSG1Q9H089 658 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 SPATA31A1Q5TZJ5 1347 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 FAM173BQ6P4H8 233 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 PTPDC1A2A3K4 754 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 CIAO1O76071 339 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 F13A1P00488 732 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 GSTO1P78417 241 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 CNNM2Q9H8M5 875 aa10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 AATFQ9NY61 560 aaKnown RBP eCLIP10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 NOL7Q9UMY1 257 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-201ENST00000319172 USP48Q86UV5 1035 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 CERKQ8TCT0 537 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 PDE6AP16499 860 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 GNAT2P19087 354 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 ALG1Q9BT22 464 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 ISCA1Q9BUE6 129 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 KAT14Q9H8E8 782 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 HSPD1P10809 573 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 CTDSPL2Q05D32 466 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 SPC24Q8NBT2 197 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 JCADQ9P266 1359 aa10.82□□□□□ -0.68
TMEM39A-201ENST00000319172 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 RTN1Q16799 776 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 KLHL40Q2TBA0 621 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 NAT10Q9H0A0 1025 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 STK32BQ9NY57 414 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 PKP1Q13835 747 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 TSPY3P0CV98 308 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 TSPY8P0CW00 308 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 ATP10DQ9P241 1426 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 E7EWF7 191 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 NLRP5P59047 1200 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 MYL10Q9BUA6 226 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 PANK2Q9BZ23 570 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 GPR108Q9NPR9 543 aa10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 SAP30BPQ9UHR5 308 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-201ENST00000319172 TXLNAP40222 546 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 FSIP1Q8NA03 581 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 IL27Q8NEV9 243 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 JAK2O60674 1132 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 FOXO4P98177 505 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 ME3Q16798 604 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 CCDC183Q5T5S1 534 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 MAP4K1Q92918 833 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 FGAP02671 866 aa10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 KDM6AO15550 1401 aaPredicted RBP10.8□□□□□ -0.68
TMEM39A-201ENST00000319172 RPS6KA4O75676 772 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 OTUD7BQ6GQQ9 843 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 SDR42E1Q8WUS8 393 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 DSCC1Q9BVC3 393 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 UBE2HP62256 183 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 SMC2O95347 1197 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 SERPINB2P05120 415 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 DPP8Q6V1X1 898 aaPredicted RBP10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 ADGRB2O60241 1585 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 OVOS2A0A0G2JMS6 1433 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 NRXN3Q9Y4C0 1643 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 HLA-DOAP06340 250 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 CYP21A2P08686 494 aa10.79□□□□□ -0.68
TMEM39A-201ENST00000319172 RXRBP28702 533 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms