RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLK4-201ENST00000316308 ELP1O95163 1332 aa17.4■□□□□ 0.38
CLK4-201ENST00000316308 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.38
CLK4-201ENST00000316308 PDE8AO60658 829 aa17.39■□□□□ 0.38
CLK4-201ENST00000316308 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.38
CLK4-201ENST00000316308 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.38
CLK4-201ENST00000316308 PTF1AQ7RTS3 328 aa17.39■□□□□ 0.38
CLK4-201ENST00000316308 TBC1D10CQ8IV04 446 aa17.39■□□□□ 0.38
CLK4-201ENST00000316308 ERCC4Q92889 916 aaPredicted RBP17.39■□□□□ 0.38
CLK4-201ENST00000316308 USP28Q96RU2 1077 aa17.39■□□□□ 0.38
CLK4-201ENST00000316308 TTC12Q9H892 705 aaPredicted RBP17.39■□□□□ 0.38
CLK4-201ENST00000316308 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.38
CLK4-201ENST00000316308 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
CLK4-201ENST00000316308 EP400Q96L91 3159 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 PRC1O43663 620 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 ADD2P35612 726 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
CLK4-201ENST00000316308 LUZP1Q86V48 1076 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
CLK4-201ENST00000316308 NUP62CLQ9H1M0 184 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 ZNF532Q9HCE3 1301 aa17.39■□□□□ 0.37
CLK4-201ENST00000316308 MYH3P11055 1940 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 SCAND2PQ9GZW5 306 aaPredicted RBP17.38■□□□□ 0.37
CLK4-201ENST00000316308 IQSEC3Q9UPP2 1182 aaPredicted RBP17.38■□□□□ 0.37
CLK4-201ENST00000316308 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
CLK4-201ENST00000316308 DDB1Q16531 1140 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
CLK4-201ENST00000316308 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 BICD2Q8TD16 824 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
CLK4-201ENST00000316308 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
CLK4-201ENST00000316308 KLF18A0A0U1RQI7 1052 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 GOLPH3LQ9H4A5 285 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 APPP05067 770 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 SPATA31A1Q5TZJ5 1347 aa17.37■□□□□ 0.37
CLK4-201ENST00000316308 SMIM22K7EJ46 135 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 TYRO3Q06418 890 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 RASGRF1Q13972 1273 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 HS1BP3Q53T59 392 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 TNMDQ9H2S6 317 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 LOC102724428A0A0B4J2F2 783 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 PDE6AP16499 860 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 SIK1P57059 783 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 MAP3K11Q16584 847 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 CCDC144CPQ8IYA2 1237 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 MYH7P12883 1935 aa17.36■□□□□ 0.37
CLK4-201ENST00000316308 ZNF213O14771 459 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 LETM1O95202 739 aaPredicted RBP17.35■□□□□ 0.37
CLK4-201ENST00000316308 POLR3DP05423 398 aaPredicted RBP17.35■□□□□ 0.37
CLK4-201ENST00000316308 FGFR2P21802 821 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 BCAMP50895 628 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 ZNF274Q96GC6 653 aaPredicted RBP17.35■□□□□ 0.37
CLK4-201ENST00000316308 LLPHQ9BRT6 129 aaKnown RBP17.35■□□□□ 0.37
CLK4-201ENST00000316308 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 TCRBV5S4A2TA0A5A2 114 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 ERVV-1B6SEH8 477 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 PRKAB2O43741 272 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
CLK4-201ENST00000316308 ANO6Q4KMQ2 910 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 SPC24Q8NBT2 197 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 MYL10Q9BUA6 226 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
CLK4-201ENST00000316308 EPB41L4AQ9HCS5 686 aaPredicted RBP17.35■□□□□ 0.37
CLK4-201ENST00000316308 TAF1P21675 1872 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 B4E1Z4 1266 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 NEDD4P46934 1319 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 ZNF500O60304 480 aaPredicted RBP17.34■□□□□ 0.37
CLK4-201ENST00000316308 OFD1O75665 1012 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 CTDSPL2Q05D32 466 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 MAGEB6Q8N7X4 407 aa17.34■□□□□ 0.37
CLK4-201ENST00000316308 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLK4-201ENST00000316308 ARID4AP29374 1257 aaPredicted RBP17.33■□□□□ 0.36
CLK4-201ENST00000316308 MCM5P33992 734 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 UVSSAQ2YD98 709 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 NCOA7Q8NI08 942 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 CLSTN2Q9H4D0 955 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 ARMT1Q9H993 441 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 CTNNA3Q9UI47 895 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
CLK4-201ENST00000316308 EVCP57679 992 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
CLK4-201ENST00000316308 NAA16Q6N069 864 aaPredicted RBP17.33■□□□□ 0.36
CLK4-201ENST00000316308 SPATA5Q8NB90 893 aa17.33■□□□□ 0.36
CLK4-201ENST00000316308 PIP4K2BP78356 416 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms