RNA–Protein interactions for RNA: ENST00000311832.5

COMMD1-201, Transcript of copper metabolism domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-201ENST00000311832 ECE1P42892 770 aa23.58■■□□□ 1.37
COMMD1-201ENST00000311832 METTL24Q5JXM2 366 aa23.58■■□□□ 1.37
COMMD1-201ENST00000311832 TDRD7Q8NHU6 1098 aaKnown RBP23.58■■□□□ 1.37
COMMD1-201ENST00000311832 GBA2Q9HCG7 927 aaPredicted RBP23.58■■□□□ 1.37
COMMD1-201ENST00000311832 PCDHAC2Q9Y5I4 1007 aa23.58■■□□□ 1.37
COMMD1-201ENST00000311832 PDE8BO95263 885 aa23.57■■□□□ 1.36
COMMD1-201ENST00000311832 IFFO2Q5TF58 517 aa23.57■■□□□ 1.36
COMMD1-201ENST00000311832 INTS3Q68E01 1043 aaKnown RBP23.57■■□□□ 1.36
COMMD1-201ENST00000311832 LRRFIP2Q9Y608 721 aaKnown RBP23.57■■□□□ 1.36
COMMD1-201ENST00000311832 FAM205AQ6ZU69 1335 aa23.57■■□□□ 1.36
COMMD1-201ENST00000311832 TRIM27P14373 513 aa23.56■■□□□ 1.36
COMMD1-201ENST00000311832 HUNKP57058 714 aa23.56■■□□□ 1.36
COMMD1-201ENST00000311832 FKBP1AP62942 108 aaKnown RBP23.56■■□□□ 1.36
COMMD1-201ENST00000311832 FGFR2P21802 821 aa23.55■■□□□ 1.36
COMMD1-201ENST00000311832 HIBADHP31937 336 aaKnown RBP23.55■■□□□ 1.36
COMMD1-201ENST00000311832 MMP14P50281 582 aa23.55■■□□□ 1.36
COMMD1-201ENST00000311832 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
COMMD1-201ENST00000311832 FBXO33Q7Z6M2 555 aa23.55■■□□□ 1.36
COMMD1-201ENST00000311832 HDAC9Q9UKV0 1011 aa23.55■■□□□ 1.36
COMMD1-201ENST00000311832 AOX1Q06278 1338 aa23.55■■□□□ 1.36
COMMD1-201ENST00000311832 F8W031 263 aaPredicted RBP23.54■■□□□ 1.36
COMMD1-201ENST00000311832 EYA2O00167 538 aa23.54■■□□□ 1.36
COMMD1-201ENST00000311832 PRAMEF18Q5VWM3 479 aa23.54■■□□□ 1.36
COMMD1-201ENST00000311832 ZIC5Q96T25 663 aa23.54■■□□□ 1.36
COMMD1-201ENST00000311832 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
COMMD1-201ENST00000311832 MAP2K1Q02750 393 aaPredicted RBP23.53■■□□□ 1.36
COMMD1-201ENST00000311832 ATF7IPQ6VMQ6 1270 aa23.53■■□□□ 1.36
COMMD1-201ENST00000311832 C2orf69Q8N8R5 385 aa23.53■■□□□ 1.36
COMMD1-201ENST00000311832 MTMR14Q8NCE2 650 aa23.53■■□□□ 1.36
COMMD1-201ENST00000311832 MAP2K2P36507 400 aa23.52■■□□□ 1.36
COMMD1-201ENST00000311832 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-201ENST00000311832 IQSEC3Q9UPP2 1182 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-201ENST00000311832 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
COMMD1-201ENST00000311832 GRIK5Q16478 980 aa23.51■■□□□ 1.35
COMMD1-201ENST00000311832 RGMBQ6NW40 437 aa23.51■■□□□ 1.35
COMMD1-201ENST00000311832 MOB2Q70IA6 237 aa23.51■■□□□ 1.35
COMMD1-201ENST00000311832 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
COMMD1-201ENST00000311832 SIL1Q9H173 461 aa23.51■■□□□ 1.35
COMMD1-201ENST00000311832 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
COMMD1-201ENST00000311832 HSPA8P11142 646 aaKnown RBP23.5■■□□□ 1.35
COMMD1-201ENST00000311832 CTCFP49711 727 aaPredicted RBP23.5■■□□□ 1.35
COMMD1-201ENST00000311832 BCAMP50895 628 aa23.5■■□□□ 1.35
COMMD1-201ENST00000311832 PUM3Q15397 648 aaKnown RBP23.5■■□□□ 1.35
COMMD1-201ENST00000311832 DLGAP5Q15398 846 aa23.5■■□□□ 1.35
COMMD1-201ENST00000311832 CFAP100Q494V2 611 aa23.5■■□□□ 1.35
COMMD1-201ENST00000311832 MFSD14BQ5SR56 506 aa23.5■■□□□ 1.35
COMMD1-201ENST00000311832 COL1A1P02452 1464 aaPredicted RBP23.49■■□□□ 1.35
COMMD1-201ENST00000311832 CLUAP1Q96AJ1 413 aa23.49■■□□□ 1.35
COMMD1-201ENST00000311832 PRMT6Q96LA8 375 aaPredicted RBP23.49■■□□□ 1.35
COMMD1-201ENST00000311832 SSC5DA1L4H1 1573 aa23.48■■□□□ 1.35
COMMD1-201ENST00000311832 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
COMMD1-201ENST00000311832 IPO8O15397 1037 aaKnown RBP23.48■■□□□ 1.35
COMMD1-201ENST00000311832 CIAO1O76071 339 aa23.48■■□□□ 1.35
COMMD1-201ENST00000311832 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
COMMD1-201ENST00000311832 LBX1P52954 281 aa23.48■■□□□ 1.35
COMMD1-201ENST00000311832 APOBEC3FQ8IUX4 373 aaKnown RBP23.48■■□□□ 1.35
COMMD1-201ENST00000311832 CAVIN4Q5BKX8 364 aa23.47■■□□□ 1.35
COMMD1-201ENST00000311832 PRDM10Q9NQV6 1147 aa23.47■■□□□ 1.35
COMMD1-201ENST00000311832 FBXO3Q9UK99 471 aa23.47■■□□□ 1.35
COMMD1-201ENST00000311832 GNAI3P08754 354 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 SLC10A3P09131 477 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 ZNF157P51786 506 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-201ENST00000311832 CHAF1AQ13111 956 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-201ENST00000311832 NOGQ13253 232 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 VPS37DQ86XT2 251 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 TMEM57Q8N5G2 664 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 COPRSQ9NQ92 184 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
COMMD1-201ENST00000311832 TTF2Q9UNY4 1162 aaKnown RBP23.46■■□□□ 1.35
COMMD1-201ENST00000311832 CLRN2A0PK11 232 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 IFIT1P09914 478 aaKnown RBP23.45■■□□□ 1.34
COMMD1-201ENST00000311832 FKBP1BP68106 108 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 MTX1Q13505 466 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 ZKSCAN2Q63HK3 967 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 LPIN2Q92539 896 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 TSKSQ9UJT2 592 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 OTOFQ9HC10 1997 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 LAMB1P07942 1786 aa23.45■■□□□ 1.34
COMMD1-201ENST00000311832 SLC5A1P13866 664 aa23.44■■□□□ 1.34
COMMD1-201ENST00000311832 RASAL3Q86YV0 1011 aa23.44■■□□□ 1.34
COMMD1-201ENST00000311832 TNS4Q8IZW8 715 aa23.44■■□□□ 1.34
COMMD1-201ENST00000311832 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
COMMD1-201ENST00000311832 UBE2Q2LH0YL09 131 aa23.43■■□□□ 1.34
COMMD1-201ENST00000311832 IL15P40933 162 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-201ENST00000311832 CCDC102AQ96A19 550 aa23.43■■□□□ 1.34
COMMD1-201ENST00000311832 DEFB129Q9H1M3 183 aa23.43■■□□□ 1.34
COMMD1-201ENST00000311832 SERPINA10Q9UK55 444 aa23.43■■□□□ 1.34
COMMD1-201ENST00000311832 FZD1Q9UP38 647 aa23.43■■□□□ 1.34
COMMD1-201ENST00000311832 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-201ENST00000311832 SRGAP3O43295 1099 aa23.42■■□□□ 1.34
COMMD1-201ENST00000311832 RBM5P52756 815 aaKnown RBP eCLIP23.42■■□□□ 1.34
COMMD1-201ENST00000311832 ATP2B3Q16720 1220 aa23.42■■□□□ 1.34
COMMD1-201ENST00000311832 RLBP1P12271 317 aa23.41■■□□□ 1.34
COMMD1-201ENST00000311832 CRKP46108 304 aa23.41■■□□□ 1.34
COMMD1-201ENST00000311832 KIF23Q02241 960 aaPredicted RBP23.41■■□□□ 1.34
COMMD1-201ENST00000311832 CEP126Q9P2H0 1117 aa23.41■■□□□ 1.34
COMMD1-201ENST00000311832 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
COMMD1-201ENST00000311832 FRAT2O75474 233 aaPredicted RBP23.4■■□□□ 1.34
COMMD1-201ENST00000311832 SPDYE2Q495Y8 402 aa23.4■■□□□ 1.34
COMMD1-201ENST00000311832 TBC1D22AQ8WUA7 517 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms