RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 CNTNAP4Q9C0A0 1308 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 A0A0D9SFI3 127 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 AP5Z1O43299 807 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 CIAO1O76071 339 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 GJB2P29033 226 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 FKBP4Q02790 459 aaKnown RBP eCLIP12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 PI16Q6UXB8 463 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 MPNDQ8N594 471 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 KCNF1Q9H3M0 494 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 CCDC171Q6TFL3 1326 aa12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 CASTP20810 708 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 DNM1Q05193 864 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 PDCL2Q8N4E4 241 aa12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
APOBEC3F-201ENST00000308521 ELP1O95163 1332 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 RFC4P35249 363 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 SCARF1Q14162 830 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 ANKRD7Q92527 254 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 AK7Q96M32 723 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 CGNQ9P2M7 1197 aaKnown RBP12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 WTIPA6NIX2 430 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 LARGE1O95461 756 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 ZNF589Q86UQ0 364 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 PYCARDQ9ULZ3 195 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
APOBEC3F-201ENST00000308521 ANKRD36CQ5JPF3 1778 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 SYCP1Q15431 976 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 TSC1Q92574 1164 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 MPHOSPH8Q99549 860 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 HAUS7Q99871 368 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 TTC39AQ5SRH9 613 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 GPR108Q9NPR9 543 aa12.11□□□□□ -0.47
APOBEC3F-201ENST00000308521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 RIOK3O14730 519 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 NPHP1O15259 732 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 CPA1P15085 419 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 ZNF771Q7L3S4 317 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 NBPF5PQ86XG9 351 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 PROM2Q8N271 834 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 ARID3AQ99856 593 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 AKAP2Q9Y2D5 859 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 ZNF609O15014 1411 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 SBF2Q86WG5 1849 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
APOBEC3F-201ENST00000308521 VGLL3A8MV65 326 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 PDE8BO95263 885 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 KRT85P78386 507 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 RGS22Q8NE09 1264 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 PDCP20941 246 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 KCNJ4P48050 445 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 VGLL2Q8N8G2 317 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 NUP62CLQ9H1M0 184 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 ALDH8A1Q9H2A2 487 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 CALCOCO1Q9P1Z2 691 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
APOBEC3F-201ENST00000308521 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZAP70P43403 619 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 MYH3P11055 1940 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 TAF1P21675 1872 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms