RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FBXO33Q7Z6M2 555 aa18.58■□□□□ 0.57
LSM6-201ENST00000296581 RBM17Q96I25 401 aaKnown RBP18.58■□□□□ 0.57
LSM6-201ENST00000296581 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.57
LSM6-201ENST00000296581 IDH1O75874 414 aaKnown RBP18.58■□□□□ 0.56
LSM6-201ENST00000296581 PDE6AP16499 860 aa18.58■□□□□ 0.56
LSM6-201ENST00000296581 PSMA5P28066 241 aa18.58■□□□□ 0.56
LSM6-201ENST00000296581 TMX3Q96JJ7 454 aa18.58■□□□□ 0.56
LSM6-201ENST00000296581 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.56
LSM6-201ENST00000296581 IRS2Q9Y4H2 1338 aa18.58■□□□□ 0.56
LSM6-201ENST00000296581 TCRBV5S4A2TA0A5A2 114 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
LSM6-201ENST00000296581 COL1A1P02452 1464 aaPredicted RBP18.57■□□□□ 0.56
LSM6-201ENST00000296581 SEMA3EO15041 775 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 KRT32Q14532 448 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 RUFY3Q7L099 469 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 CRAMP1Q96RY5 1269 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 CYP46A1Q9Y6A2 500 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 TAF6LQ9Y6J9 622 aa18.57■□□□□ 0.56
LSM6-201ENST00000296581 MYH13Q9UKX3 1938 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 ZNF532Q9HCE3 1301 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 CYP21A2P08686 494 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 MAP3K12Q12852 859 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 CUL4AQ13619 759 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 SLC15A2Q16348 729 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 LEMD3Q9Y2U8 911 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 PDS5AQ29RF7 1337 aaKnown RBP18.56■□□□□ 0.56
LSM6-201ENST00000296581 FOXP2O15409 715 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 KLRK1P26718 216 aa18.56■□□□□ 0.56
LSM6-201ENST00000296581 LRRC37AA6NMS7 1700 aa18.55■□□□□ 0.56
LSM6-201ENST00000296581 GPAA1O43292 621 aa18.55■□□□□ 0.56
LSM6-201ENST00000296581 BBOX1O75936 387 aa18.55■□□□□ 0.56
LSM6-201ENST00000296581 AK2P54819 239 aa18.55■□□□□ 0.56
LSM6-201ENST00000296581 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
LSM6-201ENST00000296581 XDHP47989 1333 aa18.55■□□□□ 0.56
LSM6-201ENST00000296581 MMP10P09238 476 aa18.54■□□□□ 0.56
LSM6-201ENST00000296581 CPA1P15085 419 aa18.54■□□□□ 0.56
LSM6-201ENST00000296581 VPS37DQ86XT2 251 aa18.54■□□□□ 0.56
LSM6-201ENST00000296581 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
LSM6-201ENST00000296581 PDRG1Q9NUG6 133 aa18.54■□□□□ 0.56
LSM6-201ENST00000296581 ALDH8A1Q9H2A2 487 aaPredicted RBP18.54■□□□□ 0.56
LSM6-201ENST00000296581 STK32BQ9NY57 414 aa18.54■□□□□ 0.56
LSM6-201ENST00000296581 HIBADHP31937 336 aaKnown RBP18.53■□□□□ 0.56
LSM6-201ENST00000296581 C15orf52Q6ZUT6 534 aaKnown RBP18.53■□□□□ 0.56
LSM6-201ENST00000296581 IQSEC3Q9UPP2 1182 aaPredicted RBP18.53■□□□□ 0.56
LSM6-201ENST00000296581 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 BLOC1S2Q6QNY1 142 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 MAGEB6Q8N7X4 407 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 CWC22Q9HCG8 908 aaKnown RBP18.53■□□□□ 0.56
LSM6-201ENST00000296581 ANKIB1Q9P2G1 1089 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 CTNNA3Q9UI47 895 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 LAMA4Q16363 1823 aa18.53■□□□□ 0.56
LSM6-201ENST00000296581 RPS6KB1P23443 525 aa18.52■□□□□ 0.56
LSM6-201ENST00000296581 TMC4Q7Z404 712 aa18.52■□□□□ 0.56
LSM6-201ENST00000296581 SLC51AQ86UW1 340 aa18.52■□□□□ 0.56
LSM6-201ENST00000296581 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.56
LSM6-201ENST00000296581 LIMCH1Q9UPQ0 1083 aa18.52■□□□□ 0.56
LSM6-201ENST00000296581 COL11A2P13942 1736 aaPredicted RBP18.52■□□□□ 0.55
LSM6-201ENST00000296581 LTBP1Q14766 1721 aa18.52■□□□□ 0.55
LSM6-201ENST00000296581 GPSM2P81274 684 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
LSM6-201ENST00000296581 NOL8Q76FK4 1167 aaKnown RBP18.51■□□□□ 0.55
LSM6-201ENST00000296581 TXNRD3Q86VQ6 643 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 LRP2BPQ9P2M1 347 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 CACNA1SQ13698 1873 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 SRGNP10124 158 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 BAG6P46379 1132 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 STOX1Q6ZVD7 989 aa18.51■□□□□ 0.55
LSM6-201ENST00000296581 ZGPATQ8N5A5 531 aaKnown RBP18.51■□□□□ 0.55
LSM6-201ENST00000296581 STRBPQ96SI9 672 aaKnown RBP18.51■□□□□ 0.55
LSM6-201ENST00000296581 FGAP02671 866 aa18.5■□□□□ 0.55
LSM6-201ENST00000296581 ATP2B4P23634 1241 aa18.5■□□□□ 0.55
LSM6-201ENST00000296581 PDE6BP35913 854 aa18.5■□□□□ 0.55
LSM6-201ENST00000296581 MSL1Q68DK7 614 aa18.5■□□□□ 0.55
LSM6-201ENST00000296581 NPR1P16066 1061 aa18.49■□□□□ 0.55
LSM6-201ENST00000296581 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
LSM6-201ENST00000296581 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
LSM6-201ENST00000296581 AIDAQ96BJ3 306 aa18.49■□□□□ 0.55
LSM6-201ENST00000296581 RAB3GAP1Q15042 981 aa18.49■□□□□ 0.55
LSM6-201ENST00000296581 ZSCAN31Q96LW9 406 aaPredicted RBP18.49■□□□□ 0.55
LSM6-201ENST00000296581 A0A0G2JLW4 131 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 HMGB1P09429 215 aaKnown RBP18.48■□□□□ 0.55
LSM6-201ENST00000296581 ANKRD1Q15327 319 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 SP8Q8IXZ3 490 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 ABCF2Q9UG63 623 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 MAST2Q6P0Q8 1798 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 ZMYM6O95789 1325 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 E7EWF7 191 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 ALX1Q15699 326 aa18.48■□□□□ 0.55
LSM6-201ENST00000296581 IMMTQ16891 758 aaKnown RBP18.48■□□□□ 0.55
LSM6-201ENST00000296581 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
LSM6-201ENST00000296581 PPEF1O14829 653 aaPredicted RBP18.47■□□□□ 0.55
LSM6-201ENST00000296581 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
LSM6-201ENST00000296581 MBD4O95243 580 aa18.47■□□□□ 0.55
LSM6-201ENST00000296581 TDRD7Q8NHU6 1098 aaKnown RBP18.47■□□□□ 0.55
LSM6-201ENST00000296581 SH2B1Q9NRF2 756 aaPredicted RBP18.47■□□□□ 0.55
LSM6-201ENST00000296581 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms