RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 KDM2BQ8NHM5 1336 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 MACROD2A1Z1Q3 448 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 CCDC113Q9H0I3 377 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.66■□□□□ 0.74
CDCP1-201ENST00000296129 PNMA6EA0A0J9YXQ4 647 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 RPS6KB1P23443 525 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
CDCP1-201ENST00000296129 SMARCC2Q8TAQ2 1214 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 SLC27A2O14975 620 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 ASIC1P78348 528 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 A1BGP04217 495 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 XRCC6P12956 609 aaKnown RBP eCLIP19.65■□□□□ 0.74
CDCP1-201ENST00000296129 NOP2P46087 812 aaKnown RBP19.65■□□□□ 0.74
CDCP1-201ENST00000296129 BICD1Q96G01 975 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 XAGE2Q96GT9 111 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 GNG11P61952 73 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 CBX1P83916 185 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 TYRO3Q06418 890 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 DENND2AQ9ULE3 1009 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 TRAPPC3LQ5T215 181 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 VEZTQ9HBM0 779 aa19.65■□□□□ 0.74
CDCP1-201ENST00000296129 CALML3P27482 149 aa19.64■□□□□ 0.74
CDCP1-201ENST00000296129 MCM7P33993 719 aa19.64■□□□□ 0.74
CDCP1-201ENST00000296129 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.74
CDCP1-201ENST00000296129 PUM3Q15397 648 aaKnown RBP19.64■□□□□ 0.73
CDCP1-201ENST00000296129 CCDC186Q7Z3E2 898 aa19.64■□□□□ 0.73
CDCP1-201ENST00000296129 RBM17Q96I25 401 aaKnown RBP19.64■□□□□ 0.73
CDCP1-201ENST00000296129 NEO1Q92859 1461 aa19.64■□□□□ 0.73
CDCP1-201ENST00000296129 AOX1Q06278 1338 aa19.64■□□□□ 0.73
CDCP1-201ENST00000296129 GOLGA6L7A0A1B0GV03 622 aa19.64■□□□□ 0.73
CDCP1-201ENST00000296129 PAXIP1Q6ZW49 1069 aaPredicted RBP19.64■□□□□ 0.73
CDCP1-201ENST00000296129 BRAPQ7Z569 592 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 JADE2Q9NQC1 790 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 PDE8AO60658 829 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 IFFO1Q0D2I5 559 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 TRAF1Q13077 416 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 PRPF4BQ13523 1007 aaKnown RBP19.63■□□□□ 0.73
CDCP1-201ENST00000296129 PARP10Q53GL7 1025 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 FAM227BQ96M60 508 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 ARMT1Q9H993 441 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 SKILP12757 684 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 SYT1P21579 422 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 WWC3Q9ULE0 1092 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 SNX14Q9Y5W7 946 aa19.63■□□□□ 0.73
CDCP1-201ENST00000296129 CDCA7Q9BWT1 371 aaPredicted RBP19.62■□□□□ 0.73
CDCP1-201ENST00000296129 SAP30BPQ9UHR5 308 aaKnown RBP19.62■□□□□ 0.73
CDCP1-201ENST00000296129 GSTTP1A0A1W2PQM5 241 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 TNNI2P48788 182 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 SH3TC1Q8TE82 1336 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 B4E1Z4 1266 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 PSMA7O14818 248 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
CDCP1-201ENST00000296129 RBM28Q9NW13 759 aaKnown RBP19.62■□□□□ 0.73
CDCP1-201ENST00000296129 POTEB2H3BUK9 544 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 DYDC1Q8WWB3 177 aa19.62■□□□□ 0.73
CDCP1-201ENST00000296129 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
CDCP1-201ENST00000296129 ZSWIM4Q9H7M6 989 aa19.61■□□□□ 0.73
CDCP1-201ENST00000296129 PUF60Q9UHX1 559 aaKnown RBP19.61■□□□□ 0.73
CDCP1-201ENST00000296129 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
CDCP1-201ENST00000296129 PLEKHG3A1L390 1219 aa19.61■□□□□ 0.73
CDCP1-201ENST00000296129 AKR1B10O60218 316 aa19.61■□□□□ 0.73
CDCP1-201ENST00000296129 CNBD1Q8NA66 436 aa19.61■□□□□ 0.73
CDCP1-201ENST00000296129 FERMT2Q96AC1 680 aa19.61■□□□□ 0.73
CDCP1-201ENST00000296129 CCDC174Q6PII3 467 aa19.61■□□□□ 0.73
CDCP1-201ENST00000296129 NAA15Q9BXJ9 866 aaKnown RBP19.61■□□□□ 0.73
CDCP1-201ENST00000296129 SPAG1Q07617 926 aa19.6■□□□□ 0.73
CDCP1-201ENST00000296129 GCKRQ14397 625 aa19.6■□□□□ 0.73
CDCP1-201ENST00000296129 MPHOSPH6Q99547 160 aaKnown RBP19.6■□□□□ 0.73
CDCP1-201ENST00000296129 PAXBP1Q9Y5B6 917 aa19.6■□□□□ 0.73
CDCP1-201ENST00000296129 LMOD1P29536 600 aaPredicted RBP19.6■□□□□ 0.73
CDCP1-201ENST00000296129 BCCIPQ9P287 314 aaKnown RBP eCLIP19.6■□□□□ 0.73
CDCP1-201ENST00000296129 HLTFQ14527 1009 aaKnown RBP eCLIP19.6■□□□□ 0.73
CDCP1-201ENST00000296129 INSRP06213 1382 aa19.6■□□□□ 0.73
CDCP1-201ENST00000296129 EYA3Q99504 573 aa19.6■□□□□ 0.73
CDCP1-201ENST00000296129 SPDYE3A6NKU9 549 aa19.6■□□□□ 0.73
CDCP1-201ENST00000296129 POLR3GO15318 223 aaPredicted RBP19.59■□□□□ 0.73
CDCP1-201ENST00000296129 EHBP1Q8NDI1 1231 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 NDUFB9Q9Y6M9 179 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 DHX37Q8IY37 1157 aaKnown RBP19.59■□□□□ 0.73
CDCP1-201ENST00000296129 UFL1O94874 794 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 CTNNA2P26232 953 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 LTKP29376 864 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 TAF5LO75529 589 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
CDCP1-201ENST00000296129 RBM26Q5T8P6 1007 aaKnown RBP19.59■□□□□ 0.73
CDCP1-201ENST00000296129 KRT79Q5XKE5 535 aa19.59■□□□□ 0.73
CDCP1-201ENST00000296129 KIAA0232Q92628 1395 aa19.58■□□□□ 0.73
CDCP1-201ENST00000296129 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.73
CDCP1-201ENST00000296129 SPAG5Q96R06 1193 aa19.58■□□□□ 0.73
CDCP1-201ENST00000296129 SHTN1A0MZ66 631 aa19.58■□□□□ 0.73
CDCP1-201ENST00000296129 NOLC1Q14978 699 aaKnown RBP eCLIP19.58■□□□□ 0.73
CDCP1-201ENST00000296129 TBC1D5Q92609 795 aa19.58■□□□□ 0.73
CDCP1-201ENST00000296129 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
CDCP1-201ENST00000296129 PARP1P09874 1014 aaKnown RBP19.58■□□□□ 0.72
CDCP1-201ENST00000296129 EZRP15311 586 aaKnown RBP19.58■□□□□ 0.72
CDCP1-201ENST00000296129 KDM6BO15054 1643 aa19.58■□□□□ 0.72
CDCP1-201ENST00000296129 SGSM2O43147 1006 aa19.58■□□□□ 0.72
CDCP1-201ENST00000296129 CYLC1P35663 651 aaPredicted RBP19.58■□□□□ 0.72
CDCP1-201ENST00000296129 STX17P56962 302 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms