RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 NBPF10Q6P3W6 841 aaKnown RBP22.34■■□□□ 1.17
LSM12-201ENST00000293406 CCAR2Q8N163 923 aaKnown RBP22.34■■□□□ 1.17
LSM12-201ENST00000293406 NBPF15Q8N660 670 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 KCNG4Q8TDN1 519 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 OSBP2Q969R2 916 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 C8orf76Q96K31 380 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 GPHNQ9NQX3 736 aaPredicted RBP22.34■■□□□ 1.17
LSM12-201ENST00000293406 KIAA1468Q9P260 1216 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 CLIC4Q9Y696 253 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 ABCC6O95255 1503 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 OTUD7BQ6GQQ9 843 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 TTLL7Q6ZT98 887 aa22.34■■□□□ 1.17
LSM12-201ENST00000293406 POLR3DP05423 398 aaPredicted RBP22.33■■□□□ 1.17
LSM12-201ENST00000293406 FKBP4Q02790 459 aaKnown RBP eCLIP22.33■■□□□ 1.17
LSM12-201ENST00000293406 IMPACTQ9P2X3 320 aa22.33■■□□□ 1.17
LSM12-201ENST00000293406 DHX16O60231 1041 aaKnown RBP22.32■■□□□ 1.16
LSM12-201ENST00000293406 LRRFIP1Q32MZ4 808 aaKnown RBP22.32■■□□□ 1.16
LSM12-201ENST00000293406 NBPF11Q86T75 865 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
LSM12-201ENST00000293406 KCND1Q9NSA2 647 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 ZNF142P52746 1687 aaPredicted RBP22.32■■□□□ 1.16
LSM12-201ENST00000293406 TMEM94Q12767 1356 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 CIAO1O76071 339 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 YEATS4O95619 227 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 IMMTQ16891 758 aaKnown RBP22.32■■□□□ 1.16
LSM12-201ENST00000293406 DPCR1Q3MIW9 517 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.32■■□□□ 1.16
LSM12-201ENST00000293406 BPIFA3Q9BQP9 254 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 POLR3EQ9NVU0 708 aa22.32■■□□□ 1.16
LSM12-201ENST00000293406 HAND2P61296 217 aa22.31■■□□□ 1.16
LSM12-201ENST00000293406 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
LSM12-201ENST00000293406 BCL11BQ9C0K0 894 aaPredicted RBP22.31■■□□□ 1.16
LSM12-201ENST00000293406 ZNF215Q9UL58 517 aaPredicted RBP22.31■■□□□ 1.16
LSM12-201ENST00000293406 SPTLC2O15270 562 aa22.31■■□□□ 1.16
LSM12-201ENST00000293406 FBXO18Q8NFZ0 1043 aa22.31■■□□□ 1.16
LSM12-201ENST00000293406 KIF18AQ8NI77 898 aa22.31■■□□□ 1.16
LSM12-201ENST00000293406 ALS2Q96Q42 1657 aa22.31■■□□□ 1.16
LSM12-201ENST00000293406 LAMB4A4D0S4 1761 aa22.31■■□□□ 1.16
LSM12-201ENST00000293406 PLEKHG2Q9H7P9 1386 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 KLF18A0A0U1RQI7 1052 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 GOLGA8BA8MQT2 603 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 WASHC4Q2M389 1173 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 BRAPQ7Z569 592 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 ATG3Q9NT62 314 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 CEP126Q9P2H0 1117 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 ORC3Q9UBD5 711 aaPredicted RBP22.3■■□□□ 1.16
LSM12-201ENST00000293406 DDX41Q9UJV9 622 aaKnown RBP22.3■■□□□ 1.16
LSM12-201ENST00000293406 SPEF2Q9C093 1822 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 KIF2AO00139 706 aaPredicted RBP22.3■■□□□ 1.16
LSM12-201ENST00000293406 PRC1O43663 620 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 SMC2O95347 1197 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 MYSM1Q5VVJ2 828 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 CCDC191Q8NCU4 936 aa22.3■■□□□ 1.16
LSM12-201ENST00000293406 PUS3Q9BZE2 481 aaKnown RBP22.3■■□□□ 1.16
LSM12-201ENST00000293406 GLI3P10071 1580 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 SLC3A2P08195 630 aaKnown RBP22.29■■□□□ 1.16
LSM12-201ENST00000293406 CCDC158Q5M9N0 1113 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 GORABQ5T7V8 394 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 XPO4Q9C0E2 1151 aaKnown RBP22.29■■□□□ 1.16
LSM12-201ENST00000293406 CPLX1O14810 134 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 TTC39AQ5SRH9 613 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 SYNE3Q6ZMZ3 975 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 ZBTB3Q9H5J0 574 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 IFNKQ9P0W0 207 aa22.29■■□□□ 1.16
LSM12-201ENST00000293406 FOXP2O15409 715 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 FGAP02671 866 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 ZFYP08048 801 aaPredicted RBP22.28■■□□□ 1.16
LSM12-201ENST00000293406 TPM4P67936 248 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 CCDC150Q8NCX0 1101 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 ERO1AQ96HE7 468 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 HPS5Q9UPZ3 1129 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 NEDD4P46934 1319 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 ZNF202O95125 648 aa22.28■■□□□ 1.16
LSM12-201ENST00000293406 MB21D2Q8IYB1 491 aaPredicted RBP22.28■■□□□ 1.16
LSM12-201ENST00000293406 ZNF397Q8NF99 534 aaPredicted RBP22.28■■□□□ 1.16
LSM12-201ENST00000293406 BIN1O00499 593 aa22.27■■□□□ 1.16
LSM12-201ENST00000293406 KIF20AO95235 890 aa22.27■■□□□ 1.16
LSM12-201ENST00000293406 NLRP12P59046 1061 aa22.27■■□□□ 1.16
LSM12-201ENST00000293406 TMC6Q7Z403 805 aa22.27■■□□□ 1.16
LSM12-201ENST00000293406 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
LSM12-201ENST00000293406 A1BGP04217 495 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 RALYLQ86SE5 291 aaKnown RBP22.26■■□□□ 1.15
LSM12-201ENST00000293406 NCOA7Q8NI08 942 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 GJB4Q9NTQ9 266 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.26■■□□□ 1.15
LSM12-201ENST00000293406 V9GYY5 206 aaPredicted RBP22.26■■□□□ 1.15
LSM12-201ENST00000293406 TJP1Q07157 1748 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 ANO1Q5XXA6 986 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 RAB11FIP4Q86YS3 637 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 COL18A1P39060 1754 aa22.26■■□□□ 1.15
LSM12-201ENST00000293406 SLU7O95391 586 aaKnown RBP22.25■■□□□ 1.15
LSM12-201ENST00000293406 SFPQP23246 707 aaKnown RBP eCLIP22.25■■□□□ 1.15
LSM12-201ENST00000293406 ADORA1P30542 326 aa22.25■■□□□ 1.15
LSM12-201ENST00000293406 CCDC57Q2TAC2 916 aa22.25■■□□□ 1.15
LSM12-201ENST00000293406 E4F1Q66K89 784 aaPredicted RBP22.25■■□□□ 1.15
LSM12-201ENST00000293406 DDX17Q92841 729 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms