RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 PLBD2Q8NHP8 589 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 RAPGEF4Q8WZA2 1011 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 ORAI2Q96SN7 254 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 XPO4Q9C0E2 1151 aaKnown RBP23.69■■□□□ 1.38
TMED4-201ENST00000289577 NAP1L2Q9ULW6 460 aaPredicted RBP23.69■■□□□ 1.38
TMED4-201ENST00000289577 CLIC4Q9Y696 253 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 SPEF2Q9C093 1822 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 PPP1R13BQ96KQ4 1090 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 NEUROD6Q96NK8 337 aa23.69■■□□□ 1.38
TMED4-201ENST00000289577 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
TMED4-201ENST00000289577 H7C1W4 665 aa23.68■■□□□ 1.38
TMED4-201ENST00000289577 STK38Q15208 465 aa23.68■■□□□ 1.38
TMED4-201ENST00000289577 ZNF771Q7L3S4 317 aaPredicted RBP23.68■■□□□ 1.38
TMED4-201ENST00000289577 FBXW7Q969H0 707 aa23.68■■□□□ 1.38
TMED4-201ENST00000289577 TUBB4AP04350 444 aa23.68■■□□□ 1.38
TMED4-201ENST00000289577 CCDC93Q567U6 631 aa23.68■■□□□ 1.38
TMED4-201ENST00000289577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.68■■□□□ 1.38
TMED4-201ENST00000289577 IFNKQ9P0W0 207 aa23.68■■□□□ 1.38
TMED4-201ENST00000289577 IL15P40933 162 aaPredicted RBP23.67■■□□□ 1.38
TMED4-201ENST00000289577 NLRP12P59046 1061 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 TIMM10P62072 90 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 NCAPHQ15003 741 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 BCL11BQ9C0K0 894 aaPredicted RBP23.67■■□□□ 1.38
TMED4-201ENST00000289577 SF3A1Q15459 793 aaKnown RBP23.67■■□□□ 1.38
TMED4-201ENST00000289577 TERF2Q15554 542 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 TTLL5Q6EMB2 1281 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 BRAPQ7Z569 592 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 FBXO18Q8NFZ0 1043 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 FMNL2Q96PY5 1086 aa23.67■■□□□ 1.38
TMED4-201ENST00000289577 M0R2C6 588 aa23.66■■□□□ 1.38
TMED4-201ENST00000289577 SPTLC2O15270 562 aa23.66■■□□□ 1.38
TMED4-201ENST00000289577 SMC2O95347 1197 aa23.66■■□□□ 1.38
TMED4-201ENST00000289577 SLC3A2P08195 630 aaKnown RBP23.66■■□□□ 1.38
TMED4-201ENST00000289577 ZRSR1Q15695 479 aaKnown RBP23.66■■□□□ 1.38
TMED4-201ENST00000289577 TMC6Q7Z403 805 aa23.66■■□□□ 1.38
TMED4-201ENST00000289577 TTC5Q8N0Z6 440 aa23.66■■□□□ 1.38
TMED4-201ENST00000289577 OTUD7BQ6GQQ9 843 aa23.65■■□□□ 1.38
TMED4-201ENST00000289577 LMOD2Q6P5Q4 547 aa23.65■■□□□ 1.38
TMED4-201ENST00000289577 C8orf76Q96K31 380 aa23.65■■□□□ 1.38
TMED4-201ENST00000289577 H2AFXP16104 143 aaPredicted RBP23.65■■□□□ 1.38
TMED4-201ENST00000289577 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
TMED4-201ENST00000289577 SFPQP23246 707 aaKnown RBP eCLIP23.65■■□□□ 1.38
TMED4-201ENST00000289577 MYSM1Q5VVJ2 828 aa23.65■■□□□ 1.38
TMED4-201ENST00000289577 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
TMED4-201ENST00000289577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.65■■□□□ 1.38
TMED4-201ENST00000289577 GPHNQ9NQX3 736 aaPredicted RBP23.65■■□□□ 1.38
TMED4-201ENST00000289577 ZNF202O95125 648 aa23.64■■□□□ 1.38
TMED4-201ENST00000289577 IFIT1P09914 478 aaKnown RBP23.64■■□□□ 1.38
TMED4-201ENST00000289577 TAF3Q5VWG9 929 aa23.64■■□□□ 1.38
TMED4-201ENST00000289577 ANKLE2Q86XL3 938 aa23.64■■□□□ 1.38
TMED4-201ENST00000289577 ZNF446Q9NWS9 450 aa23.64■■□□□ 1.38
TMED4-201ENST00000289577 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.37
TMED4-201ENST00000289577 TPM4P67936 248 aa23.64■■□□□ 1.37
TMED4-201ENST00000289577 AXDND1Q5T1B0 1012 aaPredicted RBP23.64■■□□□ 1.37
TMED4-201ENST00000289577 HPS5Q9UPZ3 1129 aa23.64■■□□□ 1.37
TMED4-201ENST00000289577 KIF1AQ12756 1690 aa23.64■■□□□ 1.37
TMED4-201ENST00000289577 MST1RQ04912 1400 aa23.64■■□□□ 1.37
TMED4-201ENST00000289577 GLI3P10071 1580 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 MEGF6O75095 1541 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 DHX16O60231 1041 aaKnown RBP23.63■■□□□ 1.37
TMED4-201ENST00000289577 POLR3DP05423 398 aaPredicted RBP23.63■■□□□ 1.37
TMED4-201ENST00000289577 CMA1P23946 247 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 RGS22Q8NE09 1264 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 OSBP2Q969R2 916 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 IKBKBO14920 756 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 FOXP2O15409 715 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 SYT10Q6XYQ8 523 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 DCAF5Q96JK2 942 aa23.63■■□□□ 1.37
TMED4-201ENST00000289577 DDX60Q8IY21 1712 aaKnown RBP23.63■■□□□ 1.37
TMED4-201ENST00000289577 EYA2O00167 538 aa23.62■■□□□ 1.37
TMED4-201ENST00000289577 ORC3Q9UBD5 711 aaPredicted RBP23.62■■□□□ 1.37
TMED4-201ENST00000289577 LAMB4A4D0S4 1761 aa23.62■■□□□ 1.37
TMED4-201ENST00000289577 ANO1Q5XXA6 986 aa23.61■■□□□ 1.37
TMED4-201ENST00000289577 NLRP2Q9NX02 1062 aa23.61■■□□□ 1.37
TMED4-201ENST00000289577 CIAO1O76071 339 aa23.61■■□□□ 1.37
TMED4-201ENST00000289577 MB21D2Q8IYB1 491 aaPredicted RBP23.61■■□□□ 1.37
TMED4-201ENST00000289577 TIGD1Q96MW7 591 aa23.61■■□□□ 1.37
TMED4-201ENST00000289577 HSD3B7Q9H2F3 369 aa23.61■■□□□ 1.37
TMED4-201ENST00000289577 A0A1B0GUL7 405 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 BIN1O00499 593 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 NRDCO43847 1150 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 PFKFB1P16118 471 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 LRRC24Q50LG9 513 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 KRT28Q7Z3Y7 464 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 PLEKHG2Q9H7P9 1386 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 TJP1Q07157 1748 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 KIF28PB7ZC32 967 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 FAM193AP78312 1265 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 FANCCQ00597 558 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 KIF23Q02241 960 aaPredicted RBP23.6■■□□□ 1.37
TMED4-201ENST00000289577 ERCC6LQ2NKX8 1250 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 SYNE3Q6ZMZ3 975 aa23.6■■□□□ 1.37
TMED4-201ENST00000289577 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.6■■□□□ 1.379e-7■□□□□ 10.1
TMED4-201ENST00000289577 KLF18A0A0U1RQI7 1052 aa23.59■■□□□ 1.37
TMED4-201ENST00000289577 PRC1O43663 620 aa23.59■■□□□ 1.37
TMED4-201ENST00000289577 IMMTQ16891 758 aaKnown RBP23.59■■□□□ 1.37
TMED4-201ENST00000289577 ATG3Q9NT62 314 aa23.59■■□□□ 1.37
TMED4-201ENST00000289577 CWC25Q9NXE8 425 aaPredicted RBP23.59■■□□□ 1.37
TMED4-201ENST00000289577 TUBE1Q9UJT0 475 aa23.59■■□□□ 1.37
TMED4-201ENST00000289577 GOLGA8BA8MQT2 603 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms