RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SPTLC3Q9NUV7 552 aa29.45■■■□□ 2.31
ROM1-201ENST00000278833 TFIP11Q9UBB9 837 aaKnown RBP29.45■■■□□ 2.31
ROM1-201ENST00000278833 STARD3NLO95772 234 aa29.44■■■□□ 2.3
ROM1-201ENST00000278833 APOBRQ0VD83 1088 aa29.44■■■□□ 2.3
ROM1-201ENST00000278833 PDIA3P30101 505 aaKnown RBP29.44■■■□□ 2.3
ROM1-201ENST00000278833 SASS6Q6UVJ0 657 aa29.44■■■□□ 2.3
ROM1-201ENST00000278833 FOXP2O15409 715 aa29.43■■■□□ 2.3
ROM1-201ENST00000278833 IFIT5Q13325 482 aaKnown RBP29.43■■■□□ 2.3
ROM1-201ENST00000278833 DNAJC10Q8IXB1 793 aa29.43■■■□□ 2.3
ROM1-201ENST00000278833 ACSBG1Q96GR2 724 aa29.43■■■□□ 2.3
ROM1-201ENST00000278833 LRRC2Q9BYS8 371 aa29.43■■■□□ 2.3
ROM1-201ENST00000278833 AP5Z1O43299 807 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 R3HCC1Q9Y3T6 440 aaKnown RBP29.42■■■□□ 2.3
ROM1-201ENST00000278833 GOLGA6L6A8MZA4 724 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 CTAGE5O15320 804 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 TRIM37O94972 964 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 SLFNL1Q499Z3 407 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 TDRD7Q8NHU6 1098 aaKnown RBP29.42■■■□□ 2.3
ROM1-201ENST00000278833 PIGBQ92521 554 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 DDX11Q96FC9 970 aa29.42■■■□□ 2.3
ROM1-201ENST00000278833 ZNF396Q96N95 335 aaPredicted RBP29.42■■■□□ 2.3
ROM1-201ENST00000278833 NUP98P52948 1817 aa29.41■■■□□ 2.3
ROM1-201ENST00000278833 ADORA1P30542 326 aa29.41■■■□□ 2.3
ROM1-201ENST00000278833 RIPOR2Q9Y4F9 1068 aa29.41■■■□□ 2.3
ROM1-201ENST00000278833 IMMTQ16891 758 aaKnown RBP29.4■■■□□ 2.3
ROM1-201ENST00000278833 BICD2Q8TD16 824 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 CARMIL3Q8ND23 1372 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 SBF2Q86WG5 1849 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 C4AP0C0L4 1744 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 C4BP0C0L5 1744 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 KCNQ2O43526 872 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 NR1I2O75469 434 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 PTF1AQ7RTS3 328 aa29.4■■■□□ 2.3
ROM1-201ENST00000278833 GORABQ5T7V8 394 aa29.39■■■□□ 2.3
ROM1-201ENST00000278833 MB21D2Q8IYB1 491 aaPredicted RBP29.39■■■□□ 2.3
ROM1-201ENST00000278833 CICQ96RK0 1608 aaPredicted RBP29.39■■■□□ 2.29
ROM1-201ENST00000278833 TPRNQ4KMQ1 711 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.38■■■□□ 2.29
ROM1-201ENST00000278833 NLRP10Q86W26 655 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 UPF1Q92900 1129 aaKnown RBP eCLIP29.38■■■□□ 2.29
ROM1-201ENST00000278833 ATP2B3Q16720 1220 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 TAF7LQ5H9L4 462 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 ZSCAN25Q6NSZ9 544 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 CBX8Q9HC52 389 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 ASAP1Q9ULH1 1129 aa29.38■■■□□ 2.29
ROM1-201ENST00000278833 A0A0G2JLW4 131 aa29.37■■■□□ 2.29
ROM1-201ENST00000278833 FKBP4Q02790 459 aaKnown RBP eCLIP29.37■■■□□ 2.29
ROM1-201ENST00000278833 NOLC1Q14978 699 aaKnown RBP eCLIP29.36■■■□□ 2.29
ROM1-201ENST00000278833 ANO6Q4KMQ2 910 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 VGLL2Q8N8G2 317 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 TTLL11Q8NHH1 800 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 FAM89AQ96GI7 184 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.36■■■□□ 2.29
ROM1-201ENST00000278833 DOCK2Q92608 1830 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 CTSWP56202 376 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 SCARF1Q14162 830 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 CAMK4Q16566 473 aa29.36■■■□□ 2.29
ROM1-201ENST00000278833 RREB1Q92766 1687 aa29.35■■■□□ 2.29
ROM1-201ENST00000278833 DOT1LQ8TEK3 1739 aa29.35■■■□□ 2.29
ROM1-201ENST00000278833 DYNC1I1O14576 645 aa29.35■■■□□ 2.29
ROM1-201ENST00000278833 ZAP70P43403 619 aa29.35■■■□□ 2.29
ROM1-201ENST00000278833 TTF1Q15361 905 aaPredicted RBP29.35■■■□□ 2.29
ROM1-201ENST00000278833 SYTL4Q96C24 671 aaPredicted RBP29.35■■■□□ 2.29
ROM1-201ENST00000278833 PRIMPOLQ96LW4 560 aa29.35■■■□□ 2.29
ROM1-201ENST00000278833 ERVV-1B6SEH8 477 aa29.34■■■□□ 2.29
ROM1-201ENST00000278833 DHX16O60231 1041 aaKnown RBP29.34■■■□□ 2.29
ROM1-201ENST00000278833 TTLL5Q6EMB2 1281 aa29.34■■■□□ 2.29
ROM1-201ENST00000278833 TTC12Q9H892 705 aaPredicted RBP29.34■■■□□ 2.29
ROM1-201ENST00000278833 FGAP02671 866 aa29.34■■■□□ 2.29
ROM1-201ENST00000278833 CYP19A1P11511 503 aaPredicted RBP29.34■■■□□ 2.29
ROM1-201ENST00000278833 CKAP2LQ8IYA6 745 aa29.34■■■□□ 2.29
ROM1-201ENST00000278833 AK7Q96M32 723 aa29.34■■■□□ 2.29
ROM1-201ENST00000278833 BCL11BQ9C0K0 894 aaPredicted RBP29.34■■■□□ 2.29
ROM1-201ENST00000278833 FDPSP14324 419 aaKnown RBP29.33■■■□□ 2.29
ROM1-201ENST00000278833 WASHC4Q2M389 1173 aa29.33■■■□□ 2.29
ROM1-201ENST00000278833 PLA2G4DQ86XP0 818 aa29.33■■■□□ 2.29
ROM1-201ENST00000278833 NCOA7Q8NI08 942 aa29.33■■■□□ 2.29
ROM1-201ENST00000278833 KIAA1524Q8TCG1 905 aa29.33■■■□□ 2.29
ROM1-201ENST00000278833 UQCRHLA0A096LP55 91 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 ANKRD18BA2A2Z9 1011 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 UQCRHP07919 91 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 CDC25BP30305 580 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 ADD2P35612 726 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 CCT2P78371 535 aaKnown RBP29.32■■■□□ 2.28
ROM1-201ENST00000278833 HSP90AA2PQ14568 343 aaPredicted RBP29.32■■■□□ 2.28
ROM1-201ENST00000278833 UBE3CQ15386 1083 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 METTL24Q5JXM2 366 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 USP28Q96RU2 1077 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 RTEL1Q9NZ71 1219 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 ZMYM6O95789 1325 aa29.32■■■□□ 2.28
ROM1-201ENST00000278833 ITGA6P23229 1130 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 ENGASEQ8NFI3 743 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 NHSQ6T4R5 1651 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 LAMB2P55268 1798 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 GPAA1O43292 621 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 PRC1O43663 620 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 ARID4AP29374 1257 aaPredicted RBP29.31■■■□□ 2.28
ROM1-201ENST00000278833 LUZP1Q86V48 1076 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 KCNF1Q9H3M0 494 aa29.31■■■□□ 2.28
ROM1-201ENST00000278833 NCOA5Q9HCD5 579 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms