RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.38■■□□□ 1.01
VPS37B-201ENST00000267202 V9GYY5 206 aaPredicted RBP21.38■■□□□ 1.01
VPS37B-201ENST00000267202 TPM3P06753 285 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 MARCKSP29966 332 aaPredicted RBP21.37■■□□□ 1.01
VPS37B-201ENST00000267202 NDUFA8P51970 172 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 HSPA2P54652 639 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 NAA16Q6N069 864 aaPredicted RBP21.37■■□□□ 1.01
VPS37B-201ENST00000267202 PALLDQ8WX93 1383 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 CPLX1O14810 134 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 FOXP2O15409 715 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 STX1AQ16623 288 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 PTPN21Q16825 1174 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 C8orf76Q96K31 380 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 ZNF396Q96N95 335 aaPredicted RBP21.37■■□□□ 1.01
VPS37B-201ENST00000267202 LLPHQ9BRT6 129 aaKnown RBP21.37■■□□□ 1.01
VPS37B-201ENST00000267202 ORC3Q9UBD5 711 aaPredicted RBP21.37■■□□□ 1.01
VPS37B-201ENST00000267202 LAMA4Q16363 1823 aa21.37■■□□□ 1.01
VPS37B-201ENST00000267202 HELBQ8NG08 1087 aaPredicted RBP21.36■■□□□ 1.01
VPS37B-201ENST00000267202 CCDC191Q8NCU4 936 aa21.35■■□□□ 1.01
VPS37B-201ENST00000267202 SNAP23O00161 211 aa21.35■■□□□ 1.01
VPS37B-201ENST00000267202 FAM160A1Q05DH4 1040 aa21.35■■□□□ 1.01
VPS37B-201ENST00000267202 IMMTQ16891 758 aaKnown RBP21.35■■□□□ 1.01
VPS37B-201ENST00000267202 DNAJC10Q8IXB1 793 aa21.35■■□□□ 1.01
VPS37B-201ENST00000267202 KIF28PB7ZC32 967 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 IDH1O75874 414 aaKnown RBP21.34■■□□□ 1.01
VPS37B-201ENST00000267202 RALYLQ86SE5 291 aaKnown RBP21.34■■□□□ 1.01
VPS37B-201ENST00000267202 MYL10Q9BUA6 226 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 UBE2Q2LH0YL09 131 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 DHX40Q8IX18 779 aaKnown RBP21.34■■□□□ 1.01
VPS37B-201ENST00000267202 SENP2Q9HC62 589 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 DPCR1Q3MIW9 517 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 METTL24Q5JXM2 366 aa21.34■■□□□ 1.01
VPS37B-201ENST00000267202 NPHP1O15259 732 aa21.33■■□□□ 1.01
VPS37B-201ENST00000267202 GPAA1O43292 621 aa21.33■■□□□ 1.01
VPS37B-201ENST00000267202 ENGASEQ8NFI3 743 aa21.33■■□□□ 1.01
VPS37B-201ENST00000267202 CAMTA1Q9Y6Y1 1673 aa21.33■■□□□ 1
VPS37B-201ENST00000267202 ANTXR2P58335 489 aa21.33■■□□□ 1
VPS37B-201ENST00000267202 ZRSR1Q15695 479 aaKnown RBP21.33■■□□□ 1
VPS37B-201ENST00000267202 MRPS27Q92552 414 aaKnown RBP21.33■■□□□ 1
VPS37B-201ENST00000267202 PHKBQ93100 1093 aa21.33■■□□□ 1
VPS37B-201ENST00000267202 MST1RQ04912 1400 aa21.33■■□□□ 1
VPS37B-201ENST00000267202 SKILP12757 684 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 ADAMTS7Q9UKP4 1686 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 CCDC69A6NI79 296 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 SMC2O95347 1197 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 GTF2F1P35269 517 aaKnown RBP eCLIP21.32■■□□□ 1
VPS37B-201ENST00000267202 HLFQ16534 295 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 LRRC8AQ8IWT6 810 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 SALL1Q9NSC2 1324 aa21.32■■□□□ 1
VPS37B-201ENST00000267202 ZNF213O14771 459 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 EVA1CP58658 441 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 IFIT5Q13325 482 aaKnown RBP21.31■■□□□ 1
VPS37B-201ENST00000267202 ZNF274Q96GC6 653 aaPredicted RBP21.31■■□□□ 1
VPS37B-201ENST00000267202 LDHAL6AQ6ZMR3 332 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 HPS5Q9UPZ3 1129 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 PCDH11XQ9BZA7 1347 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 PCDH11YQ9BZA8 1340 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 MICU3Q86XE3 530 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 AGXT2Q9BYV1 514 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 GREM2Q9H772 168 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 CNNM1Q9NRU3 951 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 ANO10Q9NW15 660 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 SPATA31A3Q5VYP0 1347 aa21.31■■□□□ 1
VPS37B-201ENST00000267202 HSP90AA4PQ58FG1 418 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 SLC9C2Q5TAH2 1124 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 CEP57L1Q8IYX8 460 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 CCDC82Q8N4S0 544 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 RFX7Q2KHR2 1363 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 ZBTB22O15209 634 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 MCAMP43121 646 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 TCIRG1Q13488 830 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 SYNE3Q6ZMZ3 975 aa21.3■■□□□ 1
VPS37B-201ENST00000267202 ZNF771Q7L3S4 317 aaPredicted RBP21.3■■□□□ 1
VPS37B-201ENST00000267202 FMR1NBQ8N0W7 255 aaPredicted RBP21.29■■□□□ 1
VPS37B-201ENST00000267202 LINC00301Q8NCQ3 95 aa21.29■■□□□ 1
VPS37B-201ENST00000267202 MAPK8IP2Q13387 824 aaPredicted RBP21.29■■□□□ 1
VPS37B-201ENST00000267202 GPR108Q9NPR9 543 aa21.29■■□□□ 1
VPS37B-201ENST00000267202 SPTLC2O15270 562 aa21.29■■□□□ 1
VPS37B-201ENST00000267202 TMOD3Q9NYL9 352 aa21.29■■□□□ 1
VPS37B-201ENST00000267202 B4E1Z4 1266 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
VPS37B-201ENST00000267202 UTP14CQ5TAP6 766 aaKnown RBP21.28■■□□□ 1
VPS37B-201ENST00000267202 NCOA7Q8NI08 942 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 ALS2Q96Q42 1657 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 CTAGE5O15320 804 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 IL2RBP14784 551 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 ITGA6P23229 1130 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 SPECC1Q5M775 1068 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 MYSM1Q5VVJ2 828 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.28■■□□□ 1
VPS37B-201ENST00000267202 MB21D2Q8IYB1 491 aaPredicted RBP21.28■■□□□ 1
VPS37B-201ENST00000267202 IFNKQ9P0W0 207 aa21.28■■□□□ 1
VPS37B-201ENST00000267202 TNS3Q68CZ2 1445 aa21.27■■□□□ 1
VPS37B-201ENST00000267202 LMOD1P29536 600 aaPredicted RBP21.27■■□□□ 1
VPS37B-201ENST00000267202 CEP135Q66GS9 1140 aa21.27■■□□□ 1
VPS37B-201ENST00000267202 CYB5R4Q7L1T6 521 aa21.27■■□□□ 1
VPS37B-201ENST00000267202 TBC1D10CQ8IV04 446 aa21.27■■□□□ 1
VPS37B-201ENST00000267202 CCDC112Q8NEF3 446 aa21.27■■□□□ 1
VPS37B-201ENST00000267202 FBXO18Q8NFZ0 1043 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms