RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 ZKSCAN8Q15776 578 aaPredicted RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 HOMEZQ8IX15 550 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 RUNDC3BQ96NL0 473 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 NAPGQ99747 312 aaPredicted RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 SLC5A1P13866 664 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 NLRP6P59044 892 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 CHMP4BP1P59074 171 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 GSTO1P78417 241 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 CKAP2LQ8IYA6 745 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 TRIML1Q8N9V2 468 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 ARHGAP45Q92619 1136 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 TBC1D32Q96NH3 1257 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 ECHDC1Q9NTX5 307 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 SH3BP5O60239 455 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 PFDN1O60925 122 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 STAT6P42226 847 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 LMNB2Q03252 620 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 MUM1Q2TAK8 710 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 TRIM60Q495X7 471 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 VEZTQ9HBM0 779 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 HMGXB3Q12766 1538 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 RSPH3Q86UC2 560 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 FAM8A1Q9UBU6 413 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 MTMR7Q9Y216 660 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 WDR46O15213 610 aaKnown RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 PRPF40BQ6NWY9 871 aaKnown RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 TMTC1Q8IUR5 882 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 MICAL1Q8TDZ2 1067 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 SIL1Q9H173 461 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 ARHGAP6O43182 974 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 KIF11P52732 1056 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 PLCB3Q01970 1234 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 FERMT3Q86UX7 667 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 EFHD1Q9BUP0 239 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 TBC1D2Q9BYX2 928 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 PPP1R9AQ9ULJ8 1098 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 INPP1P49441 399 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 APOBRQ0VD83 1088 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 SEPT2Q15019 361 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 CRACR2BQ8N4Y2 399 aaPredicted RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 CCHCR1Q8TD31 782 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 IQUBQ8NA54 791 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 EFCC1Q9HA90 598 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 KCNK9Q9NPC2 374 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 BAG5Q9UL15 447 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 NOC2LQ9Y3T9 749 aaKnown RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 COG7P83436 770 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 ITIH3Q06033 890 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 LIN9Q5TKA1 542 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 KRBA2Q6ZNG9 492 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 CERS3Q8IU89 383 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 RASEFQ8IZ41 740 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 TSC1Q92574 1164 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 NECTIN2Q92692 538 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 TEX13AQ9BXU3 409 aaPredicted RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 SPDYE4A6NLX3 237 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 IFIT3O14879 490 aaKnown RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 IDH1O75874 414 aaKnown RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 PSMD7P51665 324 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 NFE2L2Q16236 605 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 ARHGEF2Q92974 986 aaKnown RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 KIFC3Q9BVG8 833 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 C6orf50Q9HD87 102 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 RTL9Q8NET4 1388 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA8CPA6NN73 597 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 HLA-DOAP06340 250 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 GFAPP14136 432 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 BBOF1Q8ND07 529 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA5Q8TBA6 731 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 FAM71BQ8TC56 605 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 PPP4R1Q8TF05 950 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 CTTNBP2NLQ9P2B4 639 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 EPS15L1Q9UBC2 864 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 ORC3Q9UBD5 711 aaPredicted RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 PFDN6O15212 129 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 HCLS1P14317 486 aaPredicted RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 METAP2P50579 478 aaKnown RBP eCLIP6.11□□□□□ -1.43
XRN1-201ENST00000264951 CCDC186Q7Z3E2 898 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 MYRIPQ8NFW9 859 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 MAK16Q9BXY0 300 aaKnown RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 SLC52A1Q9NWF4 448 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 POLR3DP05423 398 aaPredicted RBP6.11□□□□□ -1.43
XRN1-201ENST00000264951 ANKRD20A4Q4UJ75 823 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 ANKRD20A8PQ5CZ79 823 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 ANKRD20A2Q5SQ80 823 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 ANKRD20A1Q5TYW2 823 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 RRAGBQ5VZM2 374 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
XRN1-201ENST00000264951 PPP2R5BQ15173 497 aa6.1□□□□□ -1.43
XRN1-201ENST00000264951 CCDC152Q4G0S7 254 aa6.1□□□□□ -1.43
XRN1-201ENST00000264951 CFAP221Q4G0U5 840 aa6.1□□□□□ -1.43
XRN1-201ENST00000264951 PDXDC1Q6P996 788 aa6.1□□□□□ -1.43
XRN1-201ENST00000264951 ZNF526Q8TF50 670 aaPredicted RBP6.1□□□□□ -1.43
XRN1-201ENST00000264951 MIS12Q9H081 205 aa6.1□□□□□ -1.43
XRN1-201ENST00000264951 FAM204AQ9H8W3 233 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms