RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PPP1R12BO60237 982 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-202ENST00000262396 SREBF2Q12772 1141 aa15.42■□□□□ 0.06
TRAF4-202ENST00000262396 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
TRAF4-202ENST00000262396 CLRN2A0PK11 232 aa15.41■□□□□ 0.06
TRAF4-202ENST00000262396 SUPT20HL1Q3ZLR7 823 aa15.41■□□□□ 0.06
TRAF4-202ENST00000262396 EPHA10Q5JZY3 1008 aa15.41■□□□□ 0.06
TRAF4-202ENST00000262396 SLC10A4Q96EP9 437 aa15.41■□□□□ 0.06
TRAF4-202ENST00000262396 DEFB129Q9H1M3 183 aa15.41■□□□□ 0.06
TRAF4-202ENST00000262396 PAPPA2Q9BXP8 1791 aa15.4■□□□□ 0.06
TRAF4-202ENST00000262396 E9PSI1 815 aa15.4■□□□□ 0.06
TRAF4-202ENST00000262396 HIBADHP31937 336 aaKnown RBP15.4■□□□□ 0.06
TRAF4-202ENST00000262396 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
TRAF4-202ENST00000262396 METTL24Q5JXM2 366 aa15.4■□□□□ 0.06
TRAF4-202ENST00000262396 C15orf52Q6ZUT6 534 aaKnown RBP15.4■□□□□ 0.06
TRAF4-202ENST00000262396 SUCLG2Q96I99 432 aa15.4■□□□□ 0.06
TRAF4-202ENST00000262396 TBC1D8O95759 1140 aa15.39■□□□□ 0.05
TRAF4-202ENST00000262396 IL1R1P14778 569 aa15.39■□□□□ 0.05
TRAF4-202ENST00000262396 UBE4AQ14139 1066 aa15.39■□□□□ 0.05
TRAF4-202ENST00000262396 CTU1Q7Z7A3 348 aaKnown RBP15.39■□□□□ 0.05
TRAF4-202ENST00000262396 PPP2R3BQ9Y5P8 575 aa15.39■□□□□ 0.05
TRAF4-202ENST00000262396 MROH5Q6ZUA9 1318 aa15.39■□□□□ 0.05
TRAF4-202ENST00000262396 CACNA1FO60840 1977 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 GYG1P46976 350 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 FKBP1AP62942 108 aaKnown RBP15.38■□□□□ 0.05
TRAF4-202ENST00000262396 PTPN12Q05209 780 aaKnown RBP15.38■□□□□ 0.05
TRAF4-202ENST00000262396 CHAF1AQ13111 956 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-202ENST00000262396 TNFAIP1Q13829 316 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 MFSD14BQ5SR56 506 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 TTF2Q9UNY4 1162 aaKnown RBP15.38■□□□□ 0.05
TRAF4-202ENST00000262396 PTPRCP08575 1304 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 PSME4Q14997 1843 aa15.38■□□□□ 0.05
TRAF4-202ENST00000262396 IREB2P48200 963 aaKnown RBP15.37■□□□□ 0.05
TRAF4-202ENST00000262396 CERS5Q8N5B7 392 aa15.37■□□□□ 0.05
TRAF4-202ENST00000262396 BICC1Q9H694 974 aaKnown RBP15.37■□□□□ 0.05
TRAF4-202ENST00000262396 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
TRAF4-202ENST00000262396 ALDH1A1P00352 501 aa15.36■□□□□ 0.05
TRAF4-202ENST00000262396 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-202ENST00000262396 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
TRAF4-202ENST00000262396 TNNI2P48788 182 aa15.36■□□□□ 0.05
TRAF4-202ENST00000262396 MRPL50Q8N5N7 158 aaKnown RBP15.36■□□□□ 0.05
TRAF4-202ENST00000262396 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
TRAF4-202ENST00000262396 PUS3Q9BZE2 481 aaKnown RBP15.36■□□□□ 0.05
TRAF4-202ENST00000262396 SMC4Q9NTJ3 1288 aa15.36■□□□□ 0.05
TRAF4-202ENST00000262396 COL1A1P02452 1464 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-202ENST00000262396 MANSC4A6NHS7 340 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-202ENST00000262396 OTUD7BQ6GQQ9 843 aa15.35■□□□□ 0.05
TRAF4-202ENST00000262396 PRMT6Q96LA8 375 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-202ENST00000262396 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
TRAF4-202ENST00000262396 IQSEC3Q9UPP2 1182 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-202ENST00000262396 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
TRAF4-202ENST00000262396 TM4SF4P48230 202 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 SOX10P56693 466 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 INHBEP58166 350 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 RASA3Q14644 834 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
TRAF4-202ENST00000262396 SPRYD7Q5W111 196 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 ZNF296Q8WUU4 475 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-202ENST00000262396 ZBED3Q96IU2 234 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-202ENST00000262396 TMOD2Q9NZR1 351 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 SERPINA10Q9UK55 444 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 AKAP11Q9UKA4 1901 aa15.34■□□□□ 0.05
TRAF4-202ENST00000262396 FKTNO75072 461 aa15.33■□□□□ 0.04
TRAF4-202ENST00000262396 NBPF12Q5TAG4 269 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-202ENST00000262396 TDRD7Q8NHU6 1098 aaKnown RBP15.33■□□□□ 0.04
TRAF4-202ENST00000262396 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
TRAF4-202ENST00000262396 FAM84BQ96KN1 310 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-202ENST00000262396 TDRD3Q9H7E2 651 aaKnown RBP15.33■□□□□ 0.04
TRAF4-202ENST00000262396 FAM205AQ6ZU69 1335 aa15.33■□□□□ 0.04
TRAF4-202ENST00000262396 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 GPR25O00155 361 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 CRKP46108 304 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 LDLRAD1Q5T700 205 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 ANKRD13AQ8IZ07 590 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-202ENST00000262396 HDAC5Q9UQL6 1122 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 RIPOR2Q9Y4F9 1068 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 IRS2Q9Y4H2 1338 aa15.32■□□□□ 0.04
TRAF4-202ENST00000262396 PDE8BO95263 885 aa15.31■□□□□ 0.04
TRAF4-202ENST00000262396 ZBTB48P10074 688 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-202ENST00000262396 SLC5A1P13866 664 aa15.31■□□□□ 0.04
TRAF4-202ENST00000262396 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
TRAF4-202ENST00000262396 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
TRAF4-202ENST00000262396 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
TRAF4-202ENST00000262396 UTYO14607 1347 aa15.31■□□□□ 0.04
TRAF4-202ENST00000262396 UNCXA6NJT0 531 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 MAST3O60307 1309 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 WDHD1O75717 1129 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-202ENST00000262396 UBTFL1P0CB47 393 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-202ENST00000262396 RGS19P49795 217 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 SLFN5Q08AF3 891 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
TRAF4-202ENST00000262396 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 KLHDC4Q8TBB5 520 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 CLMNQ96JQ2 1002 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 ZNF521Q96K83 1311 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms