RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
MRPL35-201ENST00000254644 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.23
MRPL35-201ENST00000254644 CCDC85CA6NKD9 419 aa16.51■□□□□ 0.23
MRPL35-201ENST00000254644 DGKZQ13574 1117 aa16.51■□□□□ 0.23
MRPL35-201ENST00000254644 LDLRAD1Q5T700 205 aa16.51■□□□□ 0.23
MRPL35-201ENST00000254644 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
MRPL35-201ENST00000254644 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
MRPL35-201ENST00000254644 TM4SF4P48230 202 aa16.5■□□□□ 0.23
MRPL35-201ENST00000254644 ZNF804AQ7Z570 1209 aa16.5■□□□□ 0.23
MRPL35-201ENST00000254644 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
MRPL35-201ENST00000254644 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
MRPL35-201ENST00000254644 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 NF2P35240 595 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 UBE4AQ14139 1066 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
MRPL35-201ENST00000254644 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
MRPL35-201ENST00000254644 RIPOR2Q9Y4F9 1068 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 PCDHAC2Q9Y5I4 1007 aa16.49■□□□□ 0.23
MRPL35-201ENST00000254644 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
MRPL35-201ENST00000254644 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
MRPL35-201ENST00000254644 PRMT6Q96LA8 375 aaPredicted RBP16.48■□□□□ 0.23
MRPL35-201ENST00000254644 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
MRPL35-201ENST00000254644 DEFB129Q9H1M3 183 aa16.48■□□□□ 0.23
MRPL35-201ENST00000254644 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
MRPL35-201ENST00000254644 SSC5DA1L4H1 1573 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 CFAP100Q494V2 611 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
MRPL35-201ENST00000254644 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 FAM84BQ96KN1 310 aaPredicted RBP16.47■□□□□ 0.23
MRPL35-201ENST00000254644 CFHR5Q9BXR6 569 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
MRPL35-201ENST00000254644 PTPRCP08575 1304 aa16.46■□□□□ 0.23
MRPL35-201ENST00000254644 AOX1Q06278 1338 aa16.46■□□□□ 0.23
MRPL35-201ENST00000254644 PDE4DIPQ5VU43 2346 aa16.46■□□□□ 0.23
MRPL35-201ENST00000254644 PLIN1O60240 522 aa16.46■□□□□ 0.23
MRPL35-201ENST00000254644 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
MRPL35-201ENST00000254644 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
MRPL35-201ENST00000254644 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
MRPL35-201ENST00000254644 MLLT1Q03111 559 aaPredicted RBP16.45■□□□□ 0.22
MRPL35-201ENST00000254644 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
MRPL35-201ENST00000254644 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
MRPL35-201ENST00000254644 OTOFQ9HC10 1997 aa16.45■□□□□ 0.22
MRPL35-201ENST00000254644 MYH13Q9UKX3 1938 aa16.45■□□□□ 0.22
MRPL35-201ENST00000254644 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
MRPL35-201ENST00000254644 E9PSI1 815 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
MRPL35-201ENST00000254644 HIBADHP31937 336 aaKnown RBP16.44■□□□□ 0.22
MRPL35-201ENST00000254644 GYG1P46976 350 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 CTU1Q7Z7A3 348 aaKnown RBP16.44■□□□□ 0.22
MRPL35-201ENST00000254644 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
MRPL35-201ENST00000254644 FZD1Q9UP38 647 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 JAG2Q9Y219 1238 aa16.44■□□□□ 0.22
MRPL35-201ENST00000254644 MYO1BO43795 1136 aa16.43■□□□□ 0.22
MRPL35-201ENST00000254644 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
MRPL35-201ENST00000254644 PRKG1Q13976 671 aa16.43■□□□□ 0.22
MRPL35-201ENST00000254644 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
MRPL35-201ENST00000254644 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
MRPL35-201ENST00000254644 SERPINA10Q9UK55 444 aa16.43■□□□□ 0.22
MRPL35-201ENST00000254644 CLRN2A0PK11 232 aa16.42■□□□□ 0.22
MRPL35-201ENST00000254644 SREBF2Q12772 1141 aa16.42■□□□□ 0.22
MRPL35-201ENST00000254644 LRRC24Q50LG9 513 aa16.42■□□□□ 0.22
MRPL35-201ENST00000254644 ZNF296Q8WUU4 475 aaPredicted RBP16.42■□□□□ 0.22
MRPL35-201ENST00000254644 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
MRPL35-201ENST00000254644 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
MRPL35-201ENST00000254644 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
MRPL35-201ENST00000254644 SUPT20HL1Q3ZLR7 823 aa16.41■□□□□ 0.22
MRPL35-201ENST00000254644 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
MRPL35-201ENST00000254644 NBPF12Q5TAG4 269 aaPredicted RBP16.41■□□□□ 0.22
MRPL35-201ENST00000254644 TTF2Q9UNY4 1162 aaKnown RBP16.41■□□□□ 0.22
MRPL35-201ENST00000254644 GPR25O00155 361 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 PDE8BO95263 885 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 ZBTB48P10074 688 aaPredicted RBP16.4■□□□□ 0.22
MRPL35-201ENST00000254644 INHBEP58166 350 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
MRPL35-201ENST00000254644 RASA3Q14644 834 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
MRPL35-201ENST00000254644 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 R3HDMLQ9H3Y0 253 aa16.4■□□□□ 0.22
MRPL35-201ENST00000254644 ZNF70Q9UC06 446 aaPredicted RBP16.4■□□□□ 0.22
MRPL35-201ENST00000254644 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
MRPL35-201ENST00000254644 HDLBPQ00341 1268 aaKnown RBP16.39■□□□□ 0.21
MRPL35-201ENST00000254644 GRIK5Q16478 980 aa16.39■□□□□ 0.21
MRPL35-201ENST00000254644 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
MRPL35-201ENST00000254644 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
MRPL35-201ENST00000254644 VEZTQ9HBM0 779 aa16.39■□□□□ 0.21
MRPL35-201ENST00000254644 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
MRPL35-201ENST00000254644 MANSC4A6NHS7 340 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms