RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 RASAL3Q86YV0 1011 aa17.4■□□□□ 0.38
PDCD5-201ENST00000221784 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
PDCD5-201ENST00000221784 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
PDCD5-201ENST00000221784 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
PDCD5-201ENST00000221784 SAGE1Q9NXZ1 904 aa17.4■□□□□ 0.38
PDCD5-201ENST00000221784 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
PDCD5-201ENST00000221784 MTMR14Q8NCE2 650 aa17.39■□□□□ 0.37
PDCD5-201ENST00000221784 RNF186Q9NXI6 227 aa17.39■□□□□ 0.37
PDCD5-201ENST00000221784 JAG2Q9Y219 1238 aa17.39■□□□□ 0.37
PDCD5-201ENST00000221784 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
PDCD5-201ENST00000221784 PSME4Q14997 1843 aa17.39■□□□□ 0.37
PDCD5-201ENST00000221784 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
PDCD5-201ENST00000221784 TRPA1O75762 1119 aa17.38■□□□□ 0.37
PDCD5-201ENST00000221784 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
PDCD5-201ENST00000221784 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
PDCD5-201ENST00000221784 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
PDCD5-201ENST00000221784 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
PDCD5-201ENST00000221784 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
PDCD5-201ENST00000221784 MYO1BO43795 1136 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 GYG1P46976 350 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 CFAP100Q494V2 611 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 ARMC9Q7Z3E5 817 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 FAM84BQ96KN1 310 aaPredicted RBP17.37■□□□□ 0.37
PDCD5-201ENST00000221784 DEFB129Q9H1M3 183 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 FAM205AQ6ZU69 1335 aa17.37■□□□□ 0.37
PDCD5-201ENST00000221784 PRKG1Q13976 671 aa17.36■□□□□ 0.37
PDCD5-201ENST00000221784 LRRC24Q50LG9 513 aa17.36■□□□□ 0.37
PDCD5-201ENST00000221784 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
PDCD5-201ENST00000221784 PRMT6Q96LA8 375 aaPredicted RBP17.36■□□□□ 0.37
PDCD5-201ENST00000221784 SMC4Q9NTJ3 1288 aa17.36■□□□□ 0.37
PDCD5-201ENST00000221784 PCDHAC2Q9Y5I4 1007 aa17.36■□□□□ 0.37
PDCD5-201ENST00000221784 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
PDCD5-201ENST00000221784 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
PDCD5-201ENST00000221784 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
PDCD5-201ENST00000221784 RBM5P52756 815 aaKnown RBP eCLIP17.35■□□□□ 0.37
PDCD5-201ENST00000221784 METTL24Q5JXM2 366 aa17.35■□□□□ 0.37
PDCD5-201ENST00000221784 MCOLN1Q9GZU1 580 aa17.35■□□□□ 0.37
PDCD5-201ENST00000221784 CCDC85CA6NKD9 419 aa17.34■□□□□ 0.37
PDCD5-201ENST00000221784 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
PDCD5-201ENST00000221784 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
PDCD5-201ENST00000221784 DGKZQ13574 1117 aa17.34■□□□□ 0.37
PDCD5-201ENST00000221784 MFSD14BQ5SR56 506 aa17.34■□□□□ 0.37
PDCD5-201ENST00000221784 FBXO33Q7Z6M2 555 aa17.34■□□□□ 0.37
PDCD5-201ENST00000221784 VPS37DQ86XT2 251 aa17.34■□□□□ 0.37
PDCD5-201ENST00000221784 ANGEL1Q9UNK9 670 aaKnown RBP17.34■□□□□ 0.37
PDCD5-201ENST00000221784 PPP2R3BQ9Y5P8 575 aa17.34■□□□□ 0.37
PDCD5-201ENST00000221784 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.37
PDCD5-201ENST00000221784 CLRN2A0PK11 232 aa17.33■□□□□ 0.36
PDCD5-201ENST00000221784 PDE8BO95263 885 aa17.33■□□□□ 0.36
PDCD5-201ENST00000221784 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
PDCD5-201ENST00000221784 LDLRAD1Q5T700 205 aa17.33■□□□□ 0.36
PDCD5-201ENST00000221784 KLHDC4Q8TBB5 520 aa17.33■□□□□ 0.36
PDCD5-201ENST00000221784 VEZTQ9HBM0 779 aa17.33■□□□□ 0.36
PDCD5-201ENST00000221784 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.36
PDCD5-201ENST00000221784 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
PDCD5-201ENST00000221784 SERPINA10Q9UK55 444 aa17.32■□□□□ 0.36
PDCD5-201ENST00000221784 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
PDCD5-201ENST00000221784 PPP1R12BO60237 982 aaPredicted RBP17.31■□□□□ 0.36
PDCD5-201ENST00000221784 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
PDCD5-201ENST00000221784 TM4SF4P48230 202 aa17.31■□□□□ 0.36
PDCD5-201ENST00000221784 MKRN3Q13064 507 aaKnown RBP17.31■□□□□ 0.36
PDCD5-201ENST00000221784 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
PDCD5-201ENST00000221784 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
PDCD5-201ENST00000221784 COL1A1P02452 1464 aaPredicted RBP17.31■□□□□ 0.36
PDCD5-201ENST00000221784 ZNF646O15015 1829 aaPredicted RBP17.31■□□□□ 0.36
PDCD5-201ENST00000221784 RASA3Q14644 834 aa17.3■□□□□ 0.36
PDCD5-201ENST00000221784 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
PDCD5-201ENST00000221784 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
PDCD5-201ENST00000221784 FZD1Q9UP38 647 aa17.3■□□□□ 0.36
PDCD5-201ENST00000221784 AOX1Q06278 1338 aa17.29■□□□□ 0.36
PDCD5-201ENST00000221784 EYA2O00167 538 aa17.29■□□□□ 0.36
PDCD5-201ENST00000221784 IFIT1P09914 478 aaKnown RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 BCAMP50895 628 aa17.29■□□□□ 0.36
PDCD5-201ENST00000221784 SREBF2Q12772 1141 aa17.29■□□□□ 0.36
PDCD5-201ENST00000221784 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 NBPF12Q5TAG4 269 aaPredicted RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 SPRYD7Q5W111 196 aa17.29■□□□□ 0.36
PDCD5-201ENST00000221784 DZIP1LQ8IYY4 767 aaKnown RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 TBC1D22AQ8WUA7 517 aa17.29■□□□□ 0.36
PDCD5-201ENST00000221784 API5Q9BZZ5 524 aaKnown RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 TDRD3Q9H7E2 651 aaKnown RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 ZNF70Q9UC06 446 aaPredicted RBP17.29■□□□□ 0.36
PDCD5-201ENST00000221784 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
PDCD5-201ENST00000221784 CRKP46108 304 aa17.28■□□□□ 0.36
PDCD5-201ENST00000221784 TNFAIP1Q13829 316 aa17.28■□□□□ 0.36
PDCD5-201ENST00000221784 PUM3Q15397 648 aaKnown RBP17.28■□□□□ 0.36
PDCD5-201ENST00000221784 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
PDCD5-201ENST00000221784 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
PDCD5-201ENST00000221784 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
PDCD5-201ENST00000221784 UNCXA6NJT0 531 aa17.27■□□□□ 0.36
PDCD5-201ENST00000221784 FGFR2P21802 821 aa17.27■□□□□ 0.36
PDCD5-201ENST00000221784 HDLBPQ00341 1268 aaKnown RBP17.27■□□□□ 0.36
PDCD5-201ENST00000221784 GRIK5Q16478 980 aa17.27■□□□□ 0.36
PDCD5-201ENST00000221784 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.36
PDCD5-201ENST00000221784 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
PDCD5-201ENST00000221784 USP2O75604 605 aaPredicted RBP17.26■□□□□ 0.35
PDCD5-201ENST00000221784 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms