RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 OPA1O60313 960 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 FAM212AQ96EL1 285 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 BICC1Q9H694 974 aaKnown RBP20.22■□□□□ 0.83
EXTL3-201ENST00000220562 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
EXTL3-201ENST00000220562 RAB3GAP1Q15042 981 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 SSX2IPQ9Y2D8 614 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 MXRA7P84157 204 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 KIF5AQ12840 1032 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 GRIPAP1Q4V328 841 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 GUCA1BQ9UMX6 200 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 KRT86O43790 486 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 HSPA4P34932 840 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 SELENOSQ9BQE4 189 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 RSPH14Q9UHP6 348 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 ABCC1P33527 1531 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 IPO4Q8TEX9 1081 aaKnown RBP20.21■□□□□ 0.83
EXTL3-201ENST00000220562 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 LZTFL1Q9NQ48 299 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 GPATCH8Q9UKJ3 1502 aaKnown RBP20.21■□□□□ 0.83
EXTL3-201ENST00000220562 SLU7O95391 586 aaKnown RBP20.21■□□□□ 0.83
EXTL3-201ENST00000220562 OGFOD1Q8N543 542 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 FBF1Q8TES7 1133 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 IMPG2Q9BZV3 1241 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 IFNKQ9P0W0 207 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 ZBTB21Q9ULJ3 1066 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 RIMS2Q9UQ26 1411 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
EXTL3-201ENST00000220562 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
EXTL3-201ENST00000220562 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 AKNAD1Q5T1N1 836 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 LRRC45Q96CN5 670 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 CCDC42Q96M95 316 aa20.21■□□□□ 0.83
EXTL3-201ENST00000220562 ZBTB9Q96C00 473 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 CCDC129Q6ZRS4 1044 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 LINS1Q8NG48 757 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 ZNF569Q5MCW4 686 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 OTUD6BQ8N6M0 293 aa20.2■□□□□ 0.82
EXTL3-201ENST00000220562 DHX32Q7L7V1 743 aaKnown RBP20.19■□□□□ 0.82
EXTL3-201ENST00000220562 JAG2Q9Y219 1238 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 ZKSCAN5Q9Y2L8 839 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 RLBP1P12271 317 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 SRRTQ9BXP5 876 aaKnown RBP20.19■□□□□ 0.82
EXTL3-201ENST00000220562 RIMBP2O15034 1052 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 VAMP4O75379 141 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 BRAPQ7Z569 592 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
EXTL3-201ENST00000220562 CCDC77Q9BR77 488 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 TCHPQ9BT92 498 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 STMN4Q9H169 189 aaPredicted RBP20.19■□□□□ 0.82
EXTL3-201ENST00000220562 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
EXTL3-201ENST00000220562 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 CHMLP26374 656 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 DTHD1Q6ZMT9 781 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 ATRIPQ8WXE1 791 aa20.19■□□□□ 0.82
EXTL3-201ENST00000220562 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 IL2RBP14784 551 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 MRPS9P82933 396 aaKnown RBP20.18■□□□□ 0.82
EXTL3-201ENST00000220562 CCDC63Q8NA47 563 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 RBM28Q9NW13 759 aaKnown RBP20.18■□□□□ 0.82
EXTL3-201ENST00000220562 FLT4P35916 1363 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 NPHP3Q7Z494 1330 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 ARL1P40616 181 aaPredicted RBP20.18■□□□□ 0.82
EXTL3-201ENST00000220562 DDB1Q16531 1140 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 NUP160Q12769 1436 aa20.18■□□□□ 0.82
EXTL3-201ENST00000220562 VTI1AQ96AJ9 217 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 SMIM23A6NLE4 172 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 CLCN1P35523 988 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 CTNND2Q9UQB3 1225 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 SYT10Q6XYQ8 523 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 TIGD1Q96MW7 591 aa20.17■□□□□ 0.82
EXTL3-201ENST00000220562 IVLP07476 585 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 IFT81Q8WYA0 676 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
EXTL3-201ENST00000220562 RHOXF2BP0C7M4 288 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 RHOXF2Q9BQY4 288 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 UHRF1BP1LA0JNW5 1464 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 SYCP2Q9BX26 1530 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 TUBB4AP04350 444 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 PLCG2P16885 1265 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 MNAT1P51948 309 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 USP26Q9BXU7 913 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 GNA11P29992 359 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 PLCB3Q01970 1234 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 ZNF174Q15697 407 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
EXTL3-201ENST00000220562 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 CCDC6Q16204 474 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 SAP30BPQ9UHR5 308 aaKnown RBP20.15■□□□□ 0.82
EXTL3-201ENST00000220562 ATP2A1O14983 1001 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 PLCH2O75038 1416 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 RAD50Q92878 1312 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms