RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 HTATSF1O43719 755 aaKnown RBP9.17□□□□□ -0.94
SCG3-201ENST00000220478 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
SCG3-201ENST00000220478 MAGEA9P43362 315 aa9.17□□□□□ -0.94
SCG3-201ENST00000220478 PSME1Q06323 249 aa9.17□□□□□ -0.94
SCG3-201ENST00000220478 TMC6Q7Z403 805 aa9.17□□□□□ -0.94
SCG3-201ENST00000220478 SMARCC2Q8TAQ2 1214 aa9.17□□□□□ -0.94
SCG3-201ENST00000220478 KDRP35968 1356 aa9.17□□□□□ -0.94
SCG3-201ENST00000220478 MRC1P22897 1456 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 PAX3P23760 479 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 BEND6Q5SZJ8 279 aaPredicted RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 ZNF589Q86UQ0 364 aaPredicted RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 CCDC150Q8NCX0 1101 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 USP28Q96RU2 1077 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 EIF3CQ99613 913 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 BRMS1Q9HCU9 246 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 PNMA2Q9UL42 364 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 RPS6KL1Q9Y6S9 549 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 SURF6O75683 361 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 ATP1A3P13637 1013 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 PTPN21Q16825 1174 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 LONRF2Q1L5Z9 754 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 LRRC31Q6UY01 552 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 SUGCTQ9HAC7 445 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 PARNO95453 639 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 PDCP20941 246 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 CORO7P57737 925 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 STK3Q13188 491 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 SART3Q15020 963 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 GGT6Q6P531 493 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 PHAXQ9H814 394 aaKnown RBP9.16□□□□□ -0.94
SCG3-201ENST00000220478 TSPOAP1O95153 1857 aa9.16□□□□□ -0.94
SCG3-201ENST00000220478 NWD2Q9ULI1 1742 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 TUBB4AP04350 444 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 LMAN1P49257 510 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 NMIQ13287 307 aaPredicted RBP9.15□□□□□ -0.94
SCG3-201ENST00000220478 KAT2BQ92831 832 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 PNKPQ96T60 521 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 C4AP0C0L4 1744 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 C4BP0C0L5 1744 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 ANKRD65E5RJM6 399 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 CTAGE5O15320 804 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 CEBPZQ03701 1054 aaKnown RBP9.15□□□□□ -0.94
SCG3-201ENST00000220478 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 SCRN1Q12765 414 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 LONRF3Q496Y0 759 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 CTR9Q6PD62 1173 aa9.15□□□□□ -0.94
SCG3-201ENST00000220478 A0A0U1RQJ8 604 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 USP5P45974 858 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 APOBRQ0VD83 1088 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 USPL1Q5W0Q7 1092 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 SUGP1Q8IWZ8 645 aaKnown RBP9.15□□□□□ -0.95
SCG3-201ENST00000220478 MSL3Q8N5Y2 521 aaKnown RBP9.15□□□□□ -0.95
SCG3-201ENST00000220478 ATRIPQ8WXE1 791 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 SLC26A8Q96RN1 970 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 SRRTQ9BXP5 876 aaKnown RBP9.15□□□□□ -0.95
SCG3-201ENST00000220478 ANO10Q9NW15 660 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 TSPYL4Q9UJ04 414 aa9.15□□□□□ -0.95
SCG3-201ENST00000220478 TMEM232C9JQI7 657 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 CREB3O43889 395 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 CHGBP05060 677 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 PLEKHO1Q53GL0 409 aaPredicted RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 SEC62Q99442 399 aaKnown RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 PDE11AQ9HCR9 933 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 ARGLU1Q9NWB6 273 aaPredicted RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 RAB21Q9UL25 225 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 A0A1B0GUL7 405 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 GOLGA6L4A6NEF3 574 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 GLRX3O76003 335 aaKnown RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 URI1O94763 535 aaPredicted RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 SFPQP23246 707 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCG3-201ENST00000220478 NDUFA8P51970 172 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 TBX2Q13207 712 aaPredicted RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 HNRNPLLQ8WVV9 542 aaKnown RBP9.14□□□□□ -0.95
SCG3-201ENST00000220478 PRR36Q9H6K5 1346 aa9.14□□□□□ -0.95
SCG3-201ENST00000220478 RICTORQ6R327 1708 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 SRGAP3O43295 1099 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 TFRCP02786 760 aaKnown RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 UBTFL1P0CB47 393 aaPredicted RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 ZFYVE27Q5T4F4 411 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 RABGGTAQ92696 567 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 DHX58Q96C10 678 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 MYCBPQ99417 103 aaPredicted RBP9.13□□□□□ -0.95
SCG3-201ENST00000220478 MTA3Q9BTC8 594 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 L1RE1Q9UN81 338 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 PPP2R3AQ06190 1150 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 WWC2Q6AWC2 1192 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 KCNV1Q6PIU1 500 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 TOGARAM2Q6ZUX3 1019 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 DPH6Q7L8W6 267 aa9.13□□□□□ -0.95
SCG3-201ENST00000220478 NSUN7Q8NE18 718 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms