RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 NBPF9Q3BBW0 867 aa31.15■■■□□ 2.58
TSR3-201ENST00000007390 FRAT1Q92837 279 aaPredicted RBP31.15■■■□□ 2.58
TSR3-201ENST00000007390 FBXO3Q9UK99 471 aa31.15■■■□□ 2.58
TSR3-201ENST00000007390 THSD7BQ9C0I4 1608 aa31.14■■■□□ 2.58
TSR3-201ENST00000007390 FBXO33Q7Z6M2 555 aa31.13■■■□□ 2.57
TSR3-201ENST00000007390 ZBED3Q96IU2 234 aaPredicted RBP31.13■■■□□ 2.57
TSR3-201ENST00000007390 PUM3Q15397 648 aaKnown RBP31.12■■■□□ 2.57
TSR3-201ENST00000007390 CYP4F22Q6NT55 531 aa31.12■■■□□ 2.57
TSR3-201ENST00000007390 CDCA5Q96FF9 252 aa31.12■■■□□ 2.57
TSR3-201ENST00000007390 CIAO1O76071 339 aa31.11■■■□□ 2.57
TSR3-201ENST00000007390 FGFR2P21802 821 aa31.11■■■□□ 2.57
TSR3-201ENST00000007390 ZKSCAN2Q63HK3 967 aa31.11■■■□□ 2.57
TSR3-201ENST00000007390 PAXIP1Q6ZW49 1069 aaPredicted RBP31.11■■■□□ 2.57
TSR3-201ENST00000007390 ATG9AQ7Z3C6 839 aa31.11■■■□□ 2.57
TSR3-201ENST00000007390 GBA2Q9HCG7 927 aaPredicted RBP31.11■■■□□ 2.57
TSR3-201ENST00000007390 TNNQ9UQP3 1299 aa31.11■■■□□ 2.57
TSR3-201ENST00000007390 CAVIN4Q5BKX8 364 aa31.1■■■□□ 2.57
TSR3-201ENST00000007390 MTMR14Q8NCE2 650 aa31.1■■■□□ 2.57
TSR3-201ENST00000007390 C2orf69Q8N8R5 385 aa31.09■■■□□ 2.57
TSR3-201ENST00000007390 WBP1LQ9NX94 342 aa31.09■■■□□ 2.57
TSR3-201ENST00000007390 JAG2Q9Y219 1238 aa31.09■■■□□ 2.57
TSR3-201ENST00000007390 IFIT1P09914 478 aaKnown RBP31.08■■■□□ 2.57
TSR3-201ENST00000007390 HUNKP57058 714 aa31.08■■■□□ 2.57
TSR3-201ENST00000007390 MTX1Q13505 466 aa31.08■■■□□ 2.57
TSR3-201ENST00000007390 VPS37DQ86XT2 251 aa31.08■■■□□ 2.57
TSR3-201ENST00000007390 CLUAP1Q96AJ1 413 aa31.08■■■□□ 2.57
TSR3-201ENST00000007390 MAP2K1Q02750 393 aaPredicted RBP31.07■■■□□ 2.56
TSR3-201ENST00000007390 DLGAP5Q15398 846 aa31.07■■■□□ 2.56
TSR3-201ENST00000007390 COPRSQ9NQ92 184 aa31.07■■■□□ 2.56
TSR3-201ENST00000007390 MFSD14BQ5SR56 506 aa31.06■■■□□ 2.56
TSR3-201ENST00000007390 SIL1Q9H173 461 aa31.06■■■□□ 2.56
TSR3-201ENST00000007390 MAP2K2P36507 400 aa31.05■■■□□ 2.56
TSR3-201ENST00000007390 APOBEC3FQ8IUX4 373 aaKnown RBP31.05■■■□□ 2.56
TSR3-201ENST00000007390 LPIN2Q92539 896 aa31.05■■■□□ 2.56
TSR3-201ENST00000007390 ARAP2Q8WZ64 1704 aa31.04■■■□□ 2.56
TSR3-201ENST00000007390 F8W031 263 aaPredicted RBP31.04■■■□□ 2.56
TSR3-201ENST00000007390 SLC5A1P13866 664 aa31.04■■■□□ 2.56
TSR3-201ENST00000007390 IL15P40933 162 aaPredicted RBP31.04■■■□□ 2.56
TSR3-201ENST00000007390 GRM1Q13255 1194 aa31.04■■■□□ 2.56
TSR3-201ENST00000007390 AIDAQ96BJ3 306 aa31.04■■■□□ 2.56
TSR3-201ENST00000007390 FOXN1O15353 648 aa31.03■■■□□ 2.56
TSR3-201ENST00000007390 BCAMP50895 628 aa31.03■■■□□ 2.56
TSR3-201ENST00000007390 FKBP1BP68106 108 aa31.03■■■□□ 2.56
TSR3-201ENST00000007390 TMEM57Q8N5G2 664 aa31.03■■■□□ 2.56
TSR3-201ENST00000007390 CEP126Q9P2H0 1117 aa31.03■■■□□ 2.56
TSR3-201ENST00000007390 PA2G4Q9UQ80 394 aaKnown RBP31.03■■■□□ 2.56
TSR3-201ENST00000007390 SPDYE2BA6NHP3 402 aa31.02■■■□□ 2.56
TSR3-201ENST00000007390 GNAI2P04899 355 aa31.02■■■□□ 2.56
TSR3-201ENST00000007390 SPDYE6P0CI01 402 aa31.02■■■□□ 2.56
TSR3-201ENST00000007390 CFAP100Q494V2 611 aa31.02■■■□□ 2.56
TSR3-201ENST00000007390 TBC1D22AQ8WUA7 517 aa31.02■■■□□ 2.56
TSR3-201ENST00000007390 SCAF8Q9UPN6 1271 aaKnown RBP31.02■■■□□ 2.56
TSR3-201ENST00000007390 COL1A1P02452 1464 aaPredicted RBP31.01■■■□□ 2.56
TSR3-201ENST00000007390 SRGAP3O43295 1099 aa31.01■■■□□ 2.55
TSR3-201ENST00000007390 RGMBQ6NW40 437 aa31.01■■■□□ 2.55
TSR3-201ENST00000007390 IQSEC3Q9UPP2 1182 aaPredicted RBP31.01■■■□□ 2.55
TSR3-201ENST00000007390 PAPPA2Q9BXP8 1791 aa31.01■■■□□ 2.55
TSR3-201ENST00000007390 AOC2O75106 756 aa31■■■□□ 2.55
TSR3-201ENST00000007390 FRAT2O75474 233 aaPredicted RBP31■■■□□ 2.55
TSR3-201ENST00000007390 ATP2B3Q16720 1220 aa31■■■□□ 2.55
TSR3-201ENST00000007390 SERPINA10Q9UK55 444 aa31■■■□□ 2.55
TSR3-201ENST00000007390 NOGQ13253 232 aa30.99■■■□□ 2.55
TSR3-201ENST00000007390 COL13A1Q5TAT6 717 aaPredicted RBP30.99■■■□□ 2.55
TSR3-201ENST00000007390 TTF2Q9UNY4 1162 aaKnown RBP30.99■■■□□ 2.55
TSR3-201ENST00000007390 PCDHAC2Q9Y5I4 1007 aa30.99■■■□□ 2.55
TSR3-201ENST00000007390 MYO1BO43795 1136 aa30.98■■■□□ 2.55
TSR3-201ENST00000007390 CTCFP49711 727 aaPredicted RBP30.98■■■□□ 2.55
TSR3-201ENST00000007390 CHAF1AQ13111 956 aaPredicted RBP30.98■■■□□ 2.55
TSR3-201ENST00000007390 FTSJ3Q8IY81 847 aaKnown RBP30.98■■■□□ 2.55
TSR3-201ENST00000007390 PRMT6Q96LA8 375 aaPredicted RBP30.98■■■□□ 2.55
TSR3-201ENST00000007390 ECM29Q5VYK3 1845 aa30.98■■■□□ 2.55
TSR3-201ENST00000007390 PRAMEF18Q5VWM3 479 aa30.97■■■□□ 2.55
TSR3-201ENST00000007390 DZIP1LQ8IYY4 767 aaKnown RBP30.97■■■□□ 2.55
TSR3-201ENST00000007390 CCDC102AQ96A19 550 aa30.97■■■□□ 2.55
TSR3-201ENST00000007390 FAM155AB1AL88 458 aaPredicted RBP30.96■■■□□ 2.55
TSR3-201ENST00000007390 NF2P35240 595 aa30.95■■■□□ 2.55
TSR3-201ENST00000007390 RBM5P52756 815 aaKnown RBP eCLIP30.95■■■□□ 2.55
TSR3-201ENST00000007390 DEFB129Q9H1M3 183 aa30.95■■■□□ 2.55
TSR3-201ENST00000007390 SUGT1Q9Y2Z0 365 aa30.95■■■□□ 2.55
TSR3-201ENST00000007390 PPP2R3BQ9Y5P8 575 aa30.95■■■□□ 2.55
TSR3-201ENST00000007390 RLBP1P12271 317 aa30.94■■■□□ 2.54
TSR3-201ENST00000007390 ZNF157P51786 506 aaPredicted RBP30.94■■■□□ 2.54
TSR3-201ENST00000007390 HDLBPQ00341 1268 aaKnown RBP30.94■■■□□ 2.54
TSR3-201ENST00000007390 GRIK5Q16478 980 aa30.94■■■□□ 2.54
TSR3-201ENST00000007390 PRDM10Q9NQV6 1147 aa30.94■■■□□ 2.54
TSR3-201ENST00000007390 AOX1Q06278 1338 aa30.94■■■□□ 2.54
TSR3-201ENST00000007390 ZBTB22O15209 634 aa30.93■■■□□ 2.54
TSR3-201ENST00000007390 BEGAINQ9BUH8 593 aa30.93■■■□□ 2.54
TSR3-201ENST00000007390 CLRN2A0PK11 232 aa30.92■■■□□ 2.54
TSR3-201ENST00000007390 SLC10A3P09131 477 aa30.92■■■□□ 2.54
TSR3-201ENST00000007390 CRKP46108 304 aa30.92■■■□□ 2.54
TSR3-201ENST00000007390 WDR66Q8TBY9 1149 aa30.92■■■□□ 2.54
TSR3-201ENST00000007390 PNMA6EA0A0J9YXQ4 647 aa30.91■■■□□ 2.54
TSR3-201ENST00000007390 SPDYE2Q495Y8 402 aa30.91■■■□□ 2.54
TSR3-201ENST00000007390 IFFO2Q5TF58 517 aa30.91■■■□□ 2.54
TSR3-201ENST00000007390 MRIQ9BWK5 157 aa30.91■■■□□ 2.54
TSR3-201ENST00000007390 GNL3LQ9NVN8 582 aaKnown RBP30.91■■■□□ 2.54
TSR3-201ENST00000007390 HSPA8P11142 646 aaKnown RBP30.9■■■□□ 2.54
TSR3-201ENST00000007390 MOB2Q70IA6 237 aa30.9■■■□□ 2.54
TSR3-201ENST00000007390 ITPRIPQ8IWB1 547 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms