RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Abcf1Q6P542 837 aaKnown RBP15.24■□□□□ 0.03
Ssr1-203ENSMUST00000225246 U2af1l4Q8BGJ9 220 aa15.24■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Fam43aQ8BUP8 424 aa15.24■□□□□ 0.03
Ssr1-203ENSMUST00000225246 AbraQ8BUZ1 375 aa15.24■□□□□ 0.03
Ssr1-203ENSMUST00000225246 4930572O03RikQ8C5Y0 211 aa15.24■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Kri1Q8VDQ9 704 aaKnown RBP15.24■□□□□ 0.03
Ssr1-203ENSMUST00000225246 H2afxP27661 143 aaKnown RBP15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Kif2aP28740 705 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Tmem59lQ7TNI2 337 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Fam53cQ8BXQ8 393 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Lmbrd2Q8C561 694 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Shisa4Q8CA71 197 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Cwc25Q9DBF7 416 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Dctpp1Q9QY93 170 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Nek3Q9R0A5 511 aa15.23■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Vmn2r23E9PXI5 849 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Myo1bP46735 1107 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Tshz1Q5DTH5 1084 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Tmem67Q8BR76 992 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Zfp202Q8C879 641 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Rbm17Q8JZX4 405 aaKnown RBP15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 SdsQ8VBT2 327 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Stard3nlQ9DCI3 235 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Elf2Q9JHC9 593 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Slc4a1P04919 929 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Ift57Q8BXG3 429 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Dnm3Q8BZ98 863 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 ImmtQ8CAQ8 757 aaKnown RBP15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Smc4Q8CG47 1286 aa15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Eif3bQ8JZQ9 803 aaKnown RBP15.22■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Cyp3a57D3YYZ0 503 aa15.21■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Trim56Q80VI1 734 aaKnown RBP15.21■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Hps3Q91VB4 1002 aa15.21■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Efcab2Q9CQ46 164 aa15.21■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Stxbp4Q9WV89 557 aa15.21■□□□□ 0.03
Ssr1-203ENSMUST00000225246 Grin2dQ03391 1323 aa15.21■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Col3a1P08121 1464 aa15.21■□□□□ 0.02
Ssr1-203ENSMUST00000225246 PsdQ5DTT2 1024 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Zranb3Q6NZP1 1069 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 IqcgQ80W32 419 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Tpcn2Q8BWC0 731 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Spata32Q8C5V0 334 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Farp2Q91VS8 1065 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Myo3bQ1EG27 1305 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ktn1Q61595 1327 aaKnown RBP15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Gm20425E9Q035 978 aaKnown RBP15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Zfp597E9Q6S0 419 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 SrprbP47758 269 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Pfkfb1P70266 471 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Prkag3Q8BGM7 489 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Frmd3Q8BHD4 595 aa15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Gtpbp4Q99ME9 634 aaKnown RBP15.2■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Abca15E9PWH4 1668 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Kdm3aQ6PCM1 1323 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Myo1aO88329 1043 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Spty2d1Q68FG3 682 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Spag5Q7TME2 1165 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Cep55Q8BT07 462 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ltb4r2Q9JJL9 360 aa15.19■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Tiam2Q6ZPF3 1715 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Gm21698A0A087WQP8 267 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Gm21671G3UY31 267 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Etf1Q8BWY3 437 aaKnown RBP15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Fam213aQ9CYH2 218 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Appbp2Q9DAX9 585 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 TnksQ6PFX9 1320 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Bcl9lQ67FY2 1494 aa15.18■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Sycp2lA0A0M3U1B0 842 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Il17raQ60943 864 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ercc6lQ8BHK9 1240 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Alx1Q8C8B0 326 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Rapgef3Q8VCC8 918 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Pcdhb22Q91XZ8 794 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Rcan1Q9JHG6 198 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 CpdO89001 1377 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Nrxn3Q6P9K9 1571 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 GmnnO88513 206 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Samsn1P57725 372 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Frat2Q8K025 231 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Tgs1Q923W1 853 aa15.17■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Lmod3E9QA62 571 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Myd88P22366 296 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ppfia3P60469 1194 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Washc4Q3UMB9 1173 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Usp13Q5BKP2 858 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ankib1Q6ZPS6 1085 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Map10Q8BJS7 891 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Gpr108Q91WD0 569 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Col4a1P02463 1669 aa15.16■□□□□ 0.02
Ssr1-203ENSMUST00000225246 TsksO54887 585 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Epb41l2O70318 988 aaKnown RBP15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Cers3Q1A3B0 383 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ric8aQ3TIR3 530 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 L1td1Q587J6 782 aaKnown RBP15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Ltv1Q6NSQ7 470 aaKnown RBP15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Trak2Q6P9N8 913 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Mei4Q8BRM6 389 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Rassf4Q8CB96 322 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Slain2Q8CI08 581 aa15.15■□□□□ 0.02
Ssr1-203ENSMUST00000225246 Mtmr6Q8VE11 617 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms