RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Sult6b1P0CC03 303 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Exosc10P56960 887 aaKnown RBP7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 DbnlQ62418 436 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 BegainQ68EF6 600 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Slc20a2Q80UP8 656 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Olfml1Q8BSH2 233 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Lmbrd2Q8C561 694 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Krt25Q8VCW2 446 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Rbm5Q91YE7 815 aaKnown RBP7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 ZwintQ9CQU5 252 aa7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tcof1O08784 1320 aaKnown RBP7.29□□□□□ -1.24
Lig4-202ENSMUST00000170033 Fkbp1aP26883 108 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Cnnm1Q0GA42 951 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Tnrc6cQ3UHC0 1690 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 GpkowQ56A08 488 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Asap2Q7SIG6 958 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ptcd1Q8C2E4 695 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 ImmtQ8CAQ8 757 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 E4f1Q8CCE9 783 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Sox30Q8CGW4 782 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Riok1Q922Q2 567 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Naa16Q9DBB4 864 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Irx4Q9QY61 515 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Scn11aQ9R053 1765 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Syde2E9PUP1 1314 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Sall1Q9ER74 1322 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Eya2O08575 532 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Pmm1O35621 262 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 RdxP26043 583 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Pa2g4P50580 394 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Rrp1P56183 494 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Usp25P57080 1055 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 EspnlQ3UYR4 1005 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Jade2Q6ZQF7 829 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ankrd13aQ80UP5 588 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 VmacQ8BP01 174 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Rapgef3Q8VCC8 918 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Polr3dQ91WD1 398 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Mrpl44Q9CY73 333 aaKnown RBP7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Fam213aQ9CYH2 218 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Speer4bQ9D9F7 267 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Osbpl5Q9ER64 874 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Crb1Q8VHS2 1405 aa7.28□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ptgs1P22437 602 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Mdm2P23804 489 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ncbp1Q3UYV9 790 aaKnown RBP7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Jarid2Q62315 1234 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Gm21985Q6P6P5 1106 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Kif11Q6P9P6 1052 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Slc5a1Q8C3K6 665 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Q8C5K5 320 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Cdca7lQ922M5 438 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Efcab2Q9CQ46 164 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Chd1lQ9CXF7 900 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Kcnq5Q9JK45 933 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Mx2Q9WVP9 655 aa7.27□□□□□ -1.24
Lig4-202ENSMUST00000170033 Ccdc112A0AUP1 442 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ugt1a5B2RT14 529 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 NmiO35309 314 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 HalP35492 657 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Gabpb2P81069 414 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Adcy5P84309 1262 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Mex3cQ05A36 652 aaKnown RBP7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Stk11ipQ3TAA7 1072 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Prpf38aQ4FK66 312 aaKnown RBP7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Zpr1Q62384 459 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Mb21d2Q8C525 428 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Noa1Q9JJG9 693 aaKnown RBP7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 AatfQ9JKX4 526 aaKnown RBP7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Myh1Q5SX40 1942 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pard3Q99NH2 1333 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Irgm2A0A140LIF8 407 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Q32P12 615 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Zranb3Q6NZP1 1069 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rimbp2Q80U40 1072 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Phf20l1Q8CCJ9 1013 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Phc3Q8CHP6 981 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rufy2Q8R4C2 606 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Akap11E9Q777 1895 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Scn4aQ9ER60 1841 aa7.27□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cdk4P30285 303 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 CalcaP70160 136 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pkp1P97350 728 aaKnown RBP7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pde4dQ01063 747 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rtel1Q0VGM9 1203 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Spink5Q148R4 1017 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Map3k13Q1HKZ5 959 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Atg9aQ68FE2 551 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Soga3Q6NZL0 945 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Abtb2Q7TQI7 1024 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ankrd1Q9CR42 319 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Zcchc8Q9CYA6 709 aaKnown RBP7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 TnmdQ9EP64 317 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 NbnQ9R207 751 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Brwd3A2AHJ4 1799 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Usp42B2RQC2 1324 aaKnown RBP7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Klhl41A2AUC9 606 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Fam160b2Q80YR2 744 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ano1Q8BHY3 960 aa7.26□□□□□ -1.25
Lig4-202ENSMUST00000170033 Alx1Q8C8B0 326 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms