RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Samd14Q8K070 417 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 2010005H15RikQ9D8D6 97 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Tcp10bE9PYJ0 438 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 OatP29758 439 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Kif20aP97329 887 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Spc25Q3UA16 226 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Fam177a1Q8BR63 207 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Lmod1Q8BVA4 595 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Lrp2bpQ9D4C6 346 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gm8257E9Q8R3 264 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gm4758L7N258 96 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Rasa2P58069 847 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Casp4P70343 373 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Exoc5Q3TPX4 708 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 B4galnt4Q766D5 1034 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Fam204aQ8C6C7 236 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Kif18aQ91WD7 886 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Lrrc59Q922Q8 307 aaKnown RBP10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gcom1E9PZ54 550 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Api5O35841 504 aaKnown RBP10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Hoxd11P23813 323 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Tex35Q14BK3 207 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Sytl1Q99N80 567 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Jakmip2D3YXK0 820 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 GfapP03995 430 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Aldh16a1Q571I9 802 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Nrde2Q80XC6 1172 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Chaf1bQ9D0N7 572 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Dthd1E9PZX1 795 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Nfe2l1Q61985 741 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Retreg2Q6NS82 541 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Pdcd6ipQ9WU78 869 aaKnown RBP10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gm44503E9PYU5 387 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Mtrf1lQ8BJU9 373 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gk5Q8BX05 534 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 VeztQ3ZK22 780 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Tbc1d12Q6A039 696 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Stk38lQ7TSE6 464 aa10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Eif4bQ8BGD9 611 aaKnown RBP10.13□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Fyb2A2A995 729 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Agr2O88312 175 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Map4P27546 1125 aaKnown RBP10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Morc2aQ69ZX6 1030 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Tmem127Q8BGP5 238 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Clul1Q3ZRW6 464 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ckap2lQ7TS74 745 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Iars2Q8BIJ6 1012 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ugp2Q91ZJ5 508 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Rfc4Q99J62 364 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Mis12Q9CY25 206 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Cul1Q9WTX6 776 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Mapk8ip3Q9ESN9 1337 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Casq2O09161 415 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 MybP06876 636 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Cetn1P41209 172 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Pdcd2P46718 343 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ccdc172Q810N9 267 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Camk2gQ923T9 529 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Psip1Q99JF8 528 aaKnown RBP10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Sh3bp5lQ99LH9 392 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ccdc81Q9D5W4 654 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ap1b1O35643 943 aaKnown RBP10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ppm1aP49443 382 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Pls1Q3V0K9 630 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ccdc189Q6NZQ0 333 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Snx2Q9CWK8 519 aa10.12□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ankib1Q6ZPS6 1085 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Rd3Q8BRE0 195 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Nlrp4aQ8BU40 982 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Egfem1Q8C088 590 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Zfp449Q8CB76 518 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Nop14Q8R3N1 860 aaKnown RBP10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Fam114a2Q8VE88 497 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Kif28pD3YXS5 1028 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Rsph10bE9PYQ0 876 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Magea1O89006 320 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 GckP52792 465 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Cfap157Q0VFX2 523 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Atg16l2Q6KAU8 623 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Stkld1Q80YS9 662 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Taco1Q8K0Z7 294 aaKnown RBP10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ccdc14Q8K2J4 934 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Luc7lQ9CYI4 371 aaKnown RBP10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Zbtb43Q9DAI4 467 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 1700011I03RikE9PYL8 271 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Rnf20Q5DTM8 973 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Casc4Q6P2L7 435 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Spata21Q8BHW6 681 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 NgefQ8CHT1 710 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Sirt1Q923E4 737 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ap2b1Q9DBG3 937 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gnl1P36916 607 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Creb3Q61817 404 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Atp1a2Q6PIE5 1020 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Zc3h6Q8BYK8 1177 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ano4Q8C5H1 955 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 ClasrpQ8CFC7 668 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Kcnj4P52189 445 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ccdc42Q5SV66 316 aa10.11□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Als2cr12Q8BVM7 383 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms