RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Tuft1O08970 390 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Csrnp1P59054 583 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Ppfia3P60469 1194 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Dynll1P63168 89 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Utp18Q5SSI6 552 aaKnown RBP10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Acap3Q6NXL5 833 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Mxd3Q80US8 206 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Znf428Q8C1M2 176 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Ccdc158Q8CDI6 1109 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Psma5Q9Z2U1 241 aaKnown RBP10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Smarce1O54941 411 aaKnown RBP10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Slc4a4O88343 1079 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 HdlbpQ8VDJ3 1268 aaKnown RBP10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Mrpl50Q8VDT9 159 aaKnown RBP10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Rufy3Q9D394 469 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Clstn1Q9EPL2 979 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cyp2ab1S4R196 498 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Olfm5Q8BU90 496 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Ces1dQ8VCT4 565 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Klf15Q9EPW2 415 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Gdpd2Q9ESM6 539 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Usp44Q8C2S0 711 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Uba5Q8VE47 403 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Slc44a4Q91VA1 707 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 Sil1Q9EPK6 465 aa10.35□□□□□ -0.75
Trim39-201ENSMUST00000042717 NapbP28663 298 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Spg7Q3ULF4 781 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Nol12Q8BG17 217 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cnot6lQ8VEG6 555 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Hmg20bQ9Z104 317 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Col3a1P08121 1464 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Heg1E9Q7X6 1337 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Mast3Q3U214 1321 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Vwa3bJ9JI28 736 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Siah1aP61092 282 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Kcna4Q61423 654 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Rps6kb1Q8BSK8 525 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 UvssaQ9D479 717 aa10.34□□□□□ -0.75
Trim39-201ENSMUST00000042717 Togaram1Q6A070 1776 aaKnown RBP10.33□□□□□ -0.75
Trim39-201ENSMUST00000042717 Tnni2P13412 182 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Rsph3aQ3UFY4 516 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Cpa2Q504N0 417 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Cyp2c67Q569X9 491 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Gpr101Q80T62 511 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Rbm43Q99J64 343 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Scn11aQ9R053 1765 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Myh4Q5SX39 1939 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Znf692Q3U381 531 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Il17raQ60943 864 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 IarsQ8BU30 1262 aa10.33□□□□□ -0.76
Trim39-201ENSMUST00000042717 Prdm1Q60636 856 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Tsr2Q8C8T8 191 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Adam1bQ8R534 806 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Gtf2iQ9ESZ8 998 aaKnown RBP10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Nup98Q6PFD9 1816 aaKnown RBP10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Usp42B2RQC2 1324 aaKnown RBP10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Kcnb2A6H8H5 907 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Atp6v1dP57746 247 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Gtf3c3Q3TMP1 882 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 PsdQ5DTT2 1024 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Sp8Q8BMJ8 486 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Cchcr1Q8K2I2 770 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Iffo2Q8R2V2 512 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Myoz2Q9JJW5 264 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Casz1Q9CWL2 1761 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Prss40A6H6T1 365 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 FosbP13346 338 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Krt40Q6IFX3 439 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Znf18Q810A1 556 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Pms1Q8K119 917 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Cd248Q91V98 765 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Ccdc39Q9D5Y1 937 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Efcc1Q9JJF6 558 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Myh15E9Q264 1925 aa10.32□□□□□ -0.76
Trim39-201ENSMUST00000042717 Sik3Q6P4S6 1311 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Plcb2A3KGF7 1181 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Elmsan1E9Q2I4 1089 aaKnown RBP10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Znf326O88291 580 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Syt1P46096 421 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 RubcnlQ3TD16 648 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Gm21985Q6P6P5 1106 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Skor1Q8BX46 964 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Shisa4Q8CA71 197 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 ImmtQ8CAQ8 757 aaKnown RBP10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Eaf2Q91ZD6 262 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Hap1O35668 628 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Csf1rP09581 977 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Cct2P80314 535 aaKnown RBP10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 WaslQ91YD9 501 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Stag1Q9D3E6 1258 aa10.31□□□□□ -0.76
Trim39-201ENSMUST00000042717 Mtcl1Q3UHU5 1945 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Gm29094F6Q785 221 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Dnajc2P54103 621 aaKnown RBP10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 EgfrQ01279 1210 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Pcsk7Q61139 770 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Myl10Q62082 202 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Atp2b4Q6Q477 1205 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 PogkQ80TC5 607 aa10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Zkscan1Q8BGS3 561 aaKnown RBP10.3□□□□□ -0.76
Trim39-201ENSMUST00000042717 Ciapin1Q8WTY4 309 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms