RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 DLL1O00548 723 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 PHF1O43189 567 aaPredicted RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 DIRAS3O95661 229 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 PPYP01298 95 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 IGHV3-9P01782 118 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 GLAP06280 429 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 MUC1P15941 1255 aaPredicted RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 ARR3P36575 388 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 P2RY1P47900 373 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 CLDN18P56856 261 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 PRDX4Q13162 271 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 MPV17LQ2QL34 196 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 BTNL8Q6UX41 500 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 FBXW12Q6X9E4 464 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 DBX2Q6ZNG2 339 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 MRPL21Q7Z2W9 205 aaKnown RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 LYZL2Q7Z4W2 148 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 DPPA2Q7Z7J5 298 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 CALHM1Q8IU99 346 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 MKXQ8IYA7 352 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 ZDHHC23Q8IYP9 409 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 GLYATL2Q8WU03 294 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 EXTL1Q92935 676 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 APOBEC3DQ96AK3 386 aaPredicted RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 MSI2Q96DH6 328 aaKnown RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 SPIN2AQ99865 258 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 SPIN2BQ9BPZ2 258 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 GPR87Q9BY21 358 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 SMIM3Q9BZL3 60 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 SPRY4Q9C004 299 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 TLNRD1Q9H1K6 362 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 RNF122Q9H9V4 155 aa6.95□□□□□ -1.3
GPC3-204ENST00000631057 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
GPC3-204ENST00000631057 NCOR1O75376 2440 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 MED12LQ86YW9 2145 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 C5orf49A4QMS7 147 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 TRAPPC2LH3BP13 241 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 MPPED1O15442 326 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 NEURL1O76050 574 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 CDS2O95674 445 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 F10P00742 488 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 TK1P04183 234 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 CD5P06127 495 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 SEC11BP0C7V7 166 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 PVALBP20472 110 aaPredicted RBP6.94□□□□□ -1.3
GPC3-204ENST00000631057 BCL3P20749 454 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 IL32P24001 234 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 NPBWR2P48146 333 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 RAB5CP51148 216 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
GPC3-204ENST00000631057 FGF12P61328 243 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 RND3P61587 244 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 SRYQ05066 204 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 HMGN3Q15651 99 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 CEACAM21Q3KPI0 293 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 FAM76BQ5HYJ3 339 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 SPINK14Q6IE38 97 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 Q6ZRG5 221 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 ABHD14BQ96IU4 210 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 LOXL4Q96JB6 756 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 GINS3Q9BRX5 216 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 PRRG4Q9BZD6 226 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 SMOC1Q9H4F8 434 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 TMEM231Q9H6L2 316 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 CALHM2Q9HA72 323 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 Q9N2K0 584 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 LUZP4Q9P127 313 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 PRELID3BQ9Y3B1 194 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 FAM96BQ9Y3D0 163 aa6.94□□□□□ -1.3
GPC3-204ENST00000631057 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 KIR2DS1A0A191URI9 304 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 C3orf85A0A1B0GTC6 90 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 DUXBA0A1W2PPF3 345 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 TRDCB7Z8K6 153 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 C9orf172C9J069 976 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 SS18L1O75177 396 aaPredicted RBP6.93□□□□□ -1.3
GPC3-204ENST00000631057 ZNF205O95201 554 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 TSPAN15O95858 294 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 NAPSAO96009 420 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 HEXAP06865 529 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 CTXN2P0C2S0 81 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 SP9P0CG40 484 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 CCNOP22674 350 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 MPLP40238 635 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 KIR2DS4P43632 304 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 GPM6AP51674 278 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 PLGLB1Q02325 96 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 PLP2Q04941 152 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 GNMTQ14749 295 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 KIR2DS1Q14954 304 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 DAZAP2Q15038 168 aaPredicted RBP6.93□□□□□ -1.3
GPC3-204ENST00000631057 PDCD1Q15116 288 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 RNPS1Q15287 305 aaKnown RBP6.93□□□□□ -1.3
GPC3-204ENST00000631057 OR1C1Q15619 314 aa6.93□□□□□ -1.3
GPC3-204ENST00000631057 LPAL2Q16609 132 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms