RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NEK6Q9HC98 313 aa8.4□□□□□ -1.06
CHMP2A-202ENST00000596708 ENOPH1Q9UHY7 261 aa8.4□□□□□ -1.06
CHMP2A-202ENST00000596708 ODAMA1E959 279 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 ZNF729A6NN14 1252 aaPredicted RBP8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 OOSP1A8MZH6 123 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 DEGS1O15121 323 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 LMO1P25800 156 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 CD34P28906 385 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 ZNF85Q03923 595 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 BNIP1Q12981 228 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 HES1Q14469 280 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 UTS2BQ765I0 119 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 MRPL41Q8IXM3 137 aaKnown RBP8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 OR5D18Q8NGL1 313 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 OR2G2Q8NGZ5 317 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 TOMM40LQ969M1 308 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 RPEQ96AT9 228 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 HRASLS5Q96KN8 279 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 MOB4Q9Y3A3 225 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 HSPE1-MOB4S4R3N1 261 aa8.39□□□□□ -1.07
CHMP2A-202ENST00000596708 IGKV1-12A0A0C4DH73 117 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 NUDT19A8MXV4 375 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 LY6LH3BQJ8 138 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 KDM4BO94953 1096 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 IGKV1D-12P01611 117 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 SNRNP70P08621 437 aaKnown RBP8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 HTR1AP08908 422 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 CCDC159P0C7I6 412 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 FASP25445 335 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 POLR2IP36954 125 aaKnown RBP8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 THBS3P49746 956 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 RPL23AP62750 156 aaKnown RBP8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 TMED1Q13445 227 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 ATXN7L3Q14CW9 347 aaPredicted RBP8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 ATP6AP1Q15904 470 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 C17orf58Q2M2W7 97 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 UNQ9370/PRO34162Q6UXP9 181 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 RNF144BQ7Z419 303 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 AMIGO2Q86SJ2 522 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 OR8J1Q8NGP2 316 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 OR13C3Q8NGS6 347 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 OR13C9Q8NGT0 318 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 OR9G1Q8NH87 305 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 RFKQ969G6 155 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 EME1Q96AY2 570 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 SPSB1Q96BD6 273 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 COQ2Q96H96 371 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 WWC2-AS2Q96NR7 200 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 CIB1Q99828 191 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 MCRIP2Q9BUT9 160 aaKnown RBP8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 COMMD4Q9H0A8 199 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 RIBC2Q9H4K1 309 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 OR6C3Q9NZP0 311 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 SORL1Q92673 2214 aa8.38□□□□□ -1.07
CHMP2A-202ENST00000596708 KMT2CQ8NEZ4 4911 aaKnown RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 A0A087X0M5 115 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 A0A1B0GX30 115 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 DAPL1A0PJW8 107 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 SERPINE3A8MV23 424 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 SLC33A1O00400 549 aaPredicted RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 IGHV3-7P01780 117 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 CSN2P05814 226 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 HCKP08631 526 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 TMEM225BP0DP42 221 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 TMEM11P17152 192 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 GLP1RP43220 463 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 ISL1P61371 349 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 DCTN2Q13561 401 aaKnown RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 HNF4GQ14541 408 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 LTC4SQ16873 150 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 UTF1Q5T230 341 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 Q6P435 159 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 ETV3LQ6ZN32 361 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 C18orf65Q6ZTR6 163 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 KCTD20Q7Z5Y7 419 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 ZNF565Q8N9K5 539 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 CHST4Q8NCG5 386 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 OR10AC1Q8NH08 325 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 OR56B4Q8NH76 319 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 CHPT1Q8WUD6 406 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 SLC7A6OSQ96CW6 309 aaPredicted RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 NOL4LQ96MY1 436 aaPredicted RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 NR1H4Q96RI1 486 aaPredicted RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 MBOAT4Q96T53 435 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 GABARAPL1Q9H0R8 117 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 PPIL3Q9H2H8 161 aaKnown RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 RHOFQ9HBH0 211 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 PCDHB16Q9NRJ7 776 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 ZFP57Q9NU63 452 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 LINC00527Q9UJ94 153 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 AMMECR1Q9Y4X0 333 aaPredicted RBP8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 AP4S1Q9Y587 144 aa8.37□□□□□ -1.07
CHMP2A-202ENST00000596708 DNAH9Q9NYC9 4486 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms