RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 MRPS24Q96EL2 167 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 REEP6Q96HR9 211 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 INTS14Q96SY0 518 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 MBOAT4Q96T53 435 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 CDRT15Q96T59 188 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 HRH4Q9H3N8 390 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 WDR76Q9H967 626 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 EDA2RQ9HAV5 297 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 MSL2Q9HCI7 577 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PAPOLBQ9NRJ5 636 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 INPP5EQ9NRR6 644 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 UFSP2Q9NUQ7 469 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SLC22A13Q9Y226 551 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 FAM32AQ9Y421 112 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PLXNB1O43157 2135 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 TRRAPQ9Y4A5 3859 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 POLQO75417 2590 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 ADGRG4Q8IZF6 3080 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 IGKV1D-17A0A075B6S4 117 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 A0A1W2PRD5 423 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 A0A1W2PRF3 423 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 A0A1W2PRM7 423 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 NUPR2A6NF83 97 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 RIIAD1A6NNX1 92 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 H0Y980 276 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 BLOC1S5-TXNDC5H3BN57 136 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 CHST1O43916 411 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 OR10H3O60404 316 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SLC16A7O60669 478 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 FCN3O75636 299 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 HLA-DRB1P01911 266 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SNRNP70P08621 437 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 UBCP0CG48 685 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 TROVE2P10155 538 aaKnown RBP eCLIP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PSG2P11465 335 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PTNP21246 168 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SLC2A5P22732 501 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SOX2P48431 317 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 CX3CR1P49238 355 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 P2RX3P56373 397 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 ISL1P61371 349 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 RAB40BQ12829 278 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PRDX4Q13162 271 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PNLIPRP3Q17RR3 467 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 HLA-DRB5Q30154 266 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 LINC01590Q5TEZ4 76 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 TMEM88Q6PEY1 159 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 WDR86Q86TI4 376 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 GID4Q8IVV7 300 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 NKAIN4Q8IVV8 208 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 FAM185AQ8N0U4 392 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 C5orf56Q8N8D9 126 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 OR5AU1Q8NGC0 362 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 OR56B2PQ8NGI1 322 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 MYDGFQ969H8 173 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 MCUR1Q96AQ8 359 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 FAM210BQ96KR6 192 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PITX2Q99697 317 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 GABARAPL1Q9H0R8 117 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 MMP28Q9H239 520 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 PPA2Q9H2U2 334 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 RIBC2Q9H4K1 309 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SLA2Q9H6Q3 261 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 SPACA1Q9HBV2 294 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 MRPL22Q9NWU5 206 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 TECRQ9NZ01 308 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 RCC2Q9P258 522 aaKnown RBP2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 ONECUT1Q9UBC0 465 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 POLR1DQ9Y2S0 133 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 COMMD3-BMI1R4GMX3 469 aa2.14□□□□□ -2.07
DEPDC1-203ENST00000488146 ARID1AO14497 2285 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 RYR2Q92736 4967 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 PRKDCP78527 4128 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 TRBV6-6A0A0A6YYG2 114 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 IGHV2-26A0A0B4J1V2 119 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 TRAV34A0A0B4J273 112 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 A0A0B4J293 547 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 LOC100653049A0A140TA62 436 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 TMEM120BA0PK00 339 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 H0YAE9 185 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 MPPED1O15442 326 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 AKR7A2O43488 359 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 EDF1O60869 148 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 GMNNO75496 209 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 PIAS1O75925 651 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 KRT34O76011 436 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 NDUFA3O95167 84 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 CD28P10747 220 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 PSMB6P28072 239 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 PRDX2P32119 198 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 RPL4P36578 427 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 ELLP55199 621 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 RPL31P62899 125 aaKnown RBP2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 ZNF92Q03936 586 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 SRSF7Q16629 238 aaKnown RBP eCLIP2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 MPV17LQ2QL34 196 aa2.13□□□□□ -2.07
DEPDC1-203ENST00000488146 AGKQ53H12 422 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms