RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CA5AP35218 305 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 LYZP61626 148 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 GGTLC2Q14390 218 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HLA-DRB5Q30154 266 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 WDFY2Q96P53 400 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HSD17B14Q9BPX1 270 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 MAGI3Q5TCQ9 1506 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 TUBGCP6Q96RT7 1819 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PIKFYVEQ9Y2I7 2098 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PRSS38A1L453 326 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 GJB5O95377 273 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 IL6RP08887 468 aaPredicted RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 ARRB2P32121 409 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 MEF2BQ02080 365 aaPredicted RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 SPANXN4Q5MJ08 99 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 TMEM236Q5W0B7 351 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ORAOV1Q8WV07 137 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 FSCN3Q9NQT6 498 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 RNF11Q9Y3C5 154 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 CSAG2Q9Y5P2 127 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 UBR2Q8IWV8 1755 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 CBR3O75828 277 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 OPN1LWP04000 364 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 FCGR2CP31995 323 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PTGER1P34995 402 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 DSCR4P56555 118 aaPredicted RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 WNT3P56703 355 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 FMODQ06828 376 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 RTP5Q14D33 572 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 PHLDA2Q53GA4 152 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 LCN15Q6UWW0 184 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 CLEC9AQ6UXN8 241 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SPNS2Q8IVW8 549 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 POC1AQ8NBT0 407 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 OR1L8Q8NGR8 309 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 DUX5Q96PT3 197 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 IGHV4-34P06331 123 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 GABRG2P18507 467 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HOXA5P20719 270 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HOXD13P35453 343 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 MAT1AQ00266 395 aaKnown RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 FUT7Q11130 342 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 IL11RAQ14626 422 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 OR2C3Q8N628 320 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 VN1R2Q8NFZ6 395 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ADOQ96SZ5 270 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SDR39U1Q9NRG7 319 aaPredicted RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 UQCR10Q9UDW1 63 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 NDUFS8O00217 210 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 FUT5Q11128 374 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SLC16A13Q7RTY0 426 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 RNF185Q96GF1 192 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 TBX15Q96SF7 602 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 C19orf43Q9BQ61 176 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HDHD3Q9BSH5 251 aaPredicted RBP4.85□□□□□ -1.63
USF3-202ENST00000478658 DCTN5Q9BTE1 182 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 HSF4Q9ULV5 492 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 SLIT2O94813 1529 aa4.85□□□□□ -1.63
USF3-202ENST00000478658 ABLIM3O94929 683 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 LMO2P25791 158 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 CKS2P33552 79 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 ACSF3Q4G176 576 aaPredicted RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 FOXB2Q5VYV0 432 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 SLC48A1Q6P1K1 146 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 LIMS2Q7Z4I7 341 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 TMEM252Q8N6L7 170 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 OR4D11Q8NGI4 311 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 MCHR2Q969V1 340 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 TEX264Q9Y6I9 313 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 LAMB1P07942 1786 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 TMED7-TICAM2A0A0A6YYA0 188 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 FAM157AC9JC47 383 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 H3BSH0 61 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 WNT10BO00744 389 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 HPXP02790 462 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 LOXL3P58215 753 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 CKS1BP61024 79 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 RPL27P61353 136 aaKnown RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 ZNF146Q15072 292 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 BSXQ3C1V8 233 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 C16orf82Q7Z2V1 217 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 CYB561A3Q8NBI2 242 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 ZMYND19Q96E35 227 aaPredicted RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 IFT22Q9H7X7 185 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 ELOVL5Q9NYP7 299 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 TMED7Q9Y3B3 224 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 C5orf49A4QMS7 147 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 TARM1B6A8C7 271 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 GPR183P32249 361 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 PCBP3P57721 371 aaKnown RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 SMAD2Q15796 467 aaKnown RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 SFT2D3Q587I9 215 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 ZNF324BQ6AW86 544 aaPredicted RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 GLDNQ6ZMI3 551 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms